Protein

Genbank accession
YP_004508446.1 [GenBank]
Protein name
triple helix repeat-containing collagen
RBP type
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MALNFPANPTPNQIYFDVSNGYRYQWVVDPQSLTGQGKWTVRTSGFNNNPAGAQGPQGFQGDPGGPQGPQGFQGPPGTGAQGPQGVPGAQGPQGDAGGPQGDPGEQGPQGEPGATTSPLIPLGITCSDETTPITTGTDKFTFTVPLNGTIDSIIASSIVAPDGSDIIIDVNKNGSSILTTEIHIDDGDVSSIGSATPYVISDDALVAGDVISVDFDQVGSTTEGTGVKLWFIIQYS
Physico‐chemical
properties
protein length:236 AA
molecular weight: 24077,94970 Da
isoelectric point:4,05003
aromaticity:0,07203
hydropathy:-0,31356

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004508446.1 [NCBI]
Genbank nucleotide accession
NC_015569 [NCBI]
CDS location
range 20791 -> 21501
strand +
CDS
ATGGCACTCAACTTTCCAGCAAACCCAACACCAAATCAAATATATTTTGATGTATCCAATGGATATAGATATCAATGGGTAGTTGATCCCCAATCTCTAACCGGTCAAGGAAAATGGACAGTTAGAACTTCTGGATTTAACAACAATCCTGCAGGTGCCCAGGGACCCCAAGGTTTCCAAGGTGATCCTGGCGGACCTCAGGGCCCACAAGGATTTCAAGGTCCACCTGGGACTGGTGCACAGGGTCCCCAAGGTGTCCCAGGTGCACAAGGTCCTCAAGGTGATGCCGGTGGTCCTCAAGGTGATCCAGGAGAACAAGGACCACAGGGTGAACCGGGTGCTACAACTTCTCCTCTAATTCCACTAGGAATCACTTGTTCGGATGAAACAACACCAATTACTACTGGGACAGATAAGTTTACATTTACAGTCCCATTGAATGGGACAATAGATTCTATTATAGCATCTTCAATTGTCGCACCAGACGGTTCAGATATAATCATAGATGTGAATAAGAATGGATCCAGTATTTTAACTACAGAAATTCATATCGATGACGGAGATGTATCGAGCATAGGATCTGCCACTCCTTATGTAATTTCAGATGATGCACTAGTTGCTGGGGATGTTATTAGTGTAGATTTTGATCAAGTCGGTTCTACTACAGAAGGAACTGGAGTCAAACTTTGGTTCATTATACAGTATAGCTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.