Protein

View in Explore
Genbank accession
A0A7S6R611 [GenBank]
Protein name
P560dep
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoCatalog
Probability 1,00
Protein sequence
MDQDIKTVIQYPVGATEFDIPFDYLSRKFVRVSLVADDNRRLLSNITEYRYVSKTRVKLLVETTGFDRVEIRRFTSASERVVDFSDGSVLRAADLNVSQLQSAHIAEEARDSALMAMPQDDAGNLDARNRRIVRLAPGIDGTDAINKNQLDTTLGEAGGILSDMKDLEGEIHDYIEKFADDTSVVRGVAWVYNLGSANGGENVITINKPTRTYAVPYIEVNGSRQEVGYHYQFDLNTQSISLVKPLEKGDFLMAMTTESSVPLESMLASAAGASSVGKLGGGTVQDFITNTESKFGSFSVLEDFGPVGTPEDTAATLLSSLSSGKPIVLTRMYSLPMRTFSIPSGTTLIGLGAKTGFKAAGGTELFVNLLEVGGTDVLLSNFAITMDAAGRGSVGSVACYGVHFLASSRGNRAQGLKITGKAVGSTVGFTHGVRCNGVRNVVDKCDIQYCSMGITLRGEYHKITNNYLNNHYVDENLGPWTAASMFWDGITGEGCINCEISGNISEYNGQSGIYFGGNNSLSQGLIITNNICRYNYNRGCDTGISGTASDTNNVIDVTYSSNILENNRETNLWLFGVSESTLIGNHIRETALYDTLFPNQASTTRAGLALGGLTCNNNEIVGNNIRVRSTTPFGIVLNGTGHYLAANRRIGGASNYIFASDNQRLVGNSIERYTGSFTPTLVGTAGINVTSATGRYEIQRNVLTVEINMTLSANGATGAIAIGYIPGLSSVTPVMRDIKVTLLNGWLPALGDKTILAREGTSNDLLNLVVFSYGNQSNEVAQYVGPASSLRITATFNTSATL
Physico‐chemical
properties
protein length:802 AA
molecular weight: 86046,50600 Da
isoelectric point:5,31197
aromaticity:0,07731
hydropathy:-0,10000

Domains

Domains [InterPro]
IPR005604
3–127
IPR005604 IPR012334
IPR011050
333–567
IPR011050 IPR006626 IPR006626
IPR006626
437–458
IPR006626 IPR006626 IPR006626
A0A7S6R611
1 802
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage P560
[NCBI] 		2777230 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
P560dep_CDS [NCBI]
Genbank nucleotide accession
A0A7S6R611 [NCBI]
CDS location
range 1 -> 2409
strand +
CDS
ATGGACCAAGACATTAAAACAGTCATTCAGTACCCAGTGGGGGCCACTGAGTTCGACATCCCGTTCGACTACCTTTCCCGCAAGTTCGTCAGAGTGTCACTAGTAGCTGACGACAACCGCAGACTGCTGAGTAATATCACTGAGTACCGCTACGTGTCTAAGACCAGAGTGAAACTCCTTGTGGAAACTACCGGATTCGACCGTGTGGAAATTCGCAGATTCACCTCAGCTTCAGAGCGTGTAGTAGACTTCAGTGATGGCTCGGTTCTCCGTGCAGCCGACCTTAACGTTTCTCAGCTTCAGTCTGCACACATCGCAGAGGAGGCTCGGGATTCTGCGCTTATGGCCATGCCTCAGGATGACGCTGGTAACCTTGATGCTCGCAACCGTAGAATCGTTCGGTTGGCTCCGGGTATTGACGGCACAGATGCTATCAATAAGAACCAGCTGGACACCACTCTAGGTGAGGCTGGCGGAATCCTATCGGACATGAAGGACCTAGAGGGGGAGATTCACGACTACATCGAGAAGTTTGCAGACGACACGTCGGTTGTGCGTGGGGTGGCGTGGGTGTATAACTTAGGGTCTGCAAACGGTGGTGAGAACGTTATTACCATTAATAAACCGACCCGCACGTACGCTGTGCCGTACATTGAGGTTAATGGCTCGCGTCAGGAGGTGGGATACCACTACCAGTTCGACCTTAATACTCAGAGCATCTCCCTAGTTAAACCTCTGGAGAAGGGTGACTTCTTAATGGCCATGACCACTGAGTCGAGCGTTCCTCTGGAATCCATGTTGGCGTCGGCTGCGGGTGCAAGCTCCGTGGGCAAACTGGGCGGCGGTACTGTTCAGGACTTCATCACCAACACTGAGTCAAAATTTGGCAGCTTTAGTGTTCTTGAGGACTTTGGGCCAGTTGGTACACCTGAGGATACGGCTGCAACTTTACTTTCATCACTTTCATCCGGTAAACCAATAGTGTTGACCAGAATGTATTCGCTTCCTATGCGTACATTTAGTATACCGAGTGGAACTACGCTGATAGGACTAGGGGCGAAAACTGGCTTCAAGGCGGCAGGAGGTACTGAGCTATTCGTCAATCTACTGGAGGTCGGTGGGACCGATGTGCTACTCTCCAACTTCGCAATCACTATGGATGCGGCAGGGCGAGGATCTGTGGGAAGCGTTGCGTGCTATGGGGTACACTTCCTCGCCAGCTCTCGTGGTAACCGTGCCCAAGGGCTTAAGATTACTGGCAAGGCCGTAGGGTCTACAGTAGGGTTCACTCACGGGGTTCGCTGTAATGGTGTTCGTAACGTTGTGGACAAGTGCGATATACAGTATTGCTCAATGGGGATAACCCTTCGAGGCGAGTACCATAAGATTACGAACAACTACCTGAACAACCACTATGTAGACGAGAACCTTGGGCCTTGGACGGCTGCGAGTATGTTCTGGGACGGAATCACTGGTGAAGGTTGCATCAACTGCGAGATTAGTGGAAACATCTCAGAGTACAATGGGCAGTCTGGAATCTACTTTGGTGGCAACAATAGCCTTAGTCAAGGTTTAATCATCACCAATAATATATGCCGCTACAACTACAACCGTGGGTGCGACACCGGAATCTCTGGGACAGCTTCTGACACAAACAACGTGATAGACGTAACGTACTCGAGCAATATTCTCGAGAACAACAGGGAGACAAACCTGTGGCTCTTCGGTGTAAGCGAGTCAACGTTGATTGGTAACCACATCCGGGAGACAGCCCTGTATGACACACTGTTCCCTAACCAAGCTAGTACTACCCGAGCAGGGCTTGCACTTGGCGGACTGACGTGTAACAACAATGAGATAGTAGGGAACAACATCCGTGTGCGCTCTACGACACCATTTGGAATCGTACTTAACGGTACCGGGCATTACCTGGCAGCCAACCGCAGGATTGGTGGTGCGTCCAACTACATCTTCGCTAGTGATAACCAGCGTTTGGTGGGTAACTCTATTGAGCGATACACAGGGTCATTCACTCCAACTTTGGTGGGCACCGCTGGCATAAACGTCACATCTGCCACAGGTCGCTATGAGATTCAACGTAACGTACTAACAGTGGAAATCAACATGACGCTGTCCGCAAATGGTGCTACAGGTGCTATCGCCATCGGGTACATCCCCGGTCTGTCTTCGGTCACACCAGTAATGCGGGACATTAAAGTTACACTGCTTAATGGGTGGCTTCCGGCTCTGGGCGATAAGACCATACTGGCTCGTGAGGGTACTAGTAATGACTTGTTGAACCTCGTAGTGTTTTCCTATGGTAACCAGTCTAACGAGGTGGCTCAGTATGTTGGCCCAGCGTCGTCCCTGAGAATTACCGCCACATTCAACACCTCAGCTACCTTATAA

DepoCatalog

K-type Target
K47
Number of Rings

11

Structural Classification
Domain Ranges
N-terminal Domain
1-309
Central Domain
310-656
C-terminal Domain
657-802
Experimentally Tested K-types
KL1
KL2
KL3
KL5
KL6
KL7
KL10
KL14
KL18
KL19
KL21
KL24
KL25
KL30
KL34
KL47
KL54
KL61
KL64
KL108
KL116
KL117
KL136
KL139
KL149
Phage Morphotype

Podo-type

Tertiary structure

1 / 2
PDB ID
Source
Method
Resolution
Oligomeric State

Literature

Title Authors Date PMID Source
Identification of a phage-derived depolymerase specific for KL47 capsule of Klebsiella pneumoniae and its therapeutic potential in mice Li, Min; Wang, Hui; Chen, Long; Guo, Genglin; Li, Pei; Ma, Jiale; Chen, Rong; Du, Hong; Liu, Yuqing; Zhang, Wei 2022-01-01 — 10.1016/j.virs.2022.04.005