Protein

UniProt accession

R4JMA0 [UniProt]

Protein name

Tailspike protein

RBP type

TSP

evidence: UniProt/TrEMBL

probability: 1,0000

TSP

evidence: GenBank

probability: 1,0000

TSP

evidence: Phold

probability: 1,0000

TSP

evidence: DepoScope

probability: 1,0000

TSP

evidence: RBPdetect

probability: 0,9478

TSP

evidence: RBPdetect2

probability: 0,9550

Protein sequence

MSSGCGDVLSLNDLQIAKKHQIFEAEVITGKQGGVAGGADIDYATNQVTGQTQKTLPAVLRDAGFSPASFNFTTGGTLGINDANKAVLWPKEDGGDGNYYAWRGSLPKVIPAASTPLTTGGISDSAWVAFGDITFRAEADKKFKYSVKLSDFTTLQQLADAAVDSILIDRDYNFSNNETVNFGGKTLTIDCKAKFIGDGNLVFTQLGKGSIVIAPFMESATTPWVIKPWTDDNQWITDPAAIVATLKQSKTDGYQPTVNDYAKFPGIESLLPPEAKGQSISSTLEIRECTGVEVHRASGLMACFLFRGCHFCKMVDADNPSGGAHGVITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFARDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSAVLYPVWDGFDLGADTDMNPEDDRPGDFPISQYPVHMLPLNHLIDNLFVRGSLGVGFGMDGQGLYVSNITVEDCAGSGAYILAHETVFTNIAIIDTNTKNFPANQIYISGACRVNGLRLVGIRSTTEQGMTVDAPNSTVSGITGFVDPSRINVANLMEEGLGNSRINSFNNDSAALRFRIHKLSKTLDSGSVYSHINGGPGSGSAWTEITAIAGSLPDAVSLKINRGDYRAVEIPVATTVLPDNAVRDNGSISLYLEGDSLKALVKRADGSYTRLTLA

Physico‐chemical properties

protein length:	684 AA
molecular weight:	72924,69790 Da
isoelectric point:	5,15668
aromaticity:	0,08918
hydropathy:	-0,16213

Domains

Domains [InterPro]

IPR040775
71–132

IPR040775 IPR011050

IPR012332
136–684

IPR012332

IPR015331
138–684

IPR015331

R4JMA0

1 684

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Domains [InterPro]

InterPro ID	Start	End	Source	Name
IPR040775	71	132	Pfam	Tail spike TSP1/Gp66, N-terminal domain
IPR011050	135	684	SUPFAM	Pectin lyase fold/virulence factor
IPR012332	136	684	Gene3D	Autotransporter, pectate lyase C-like domain superfamily
IPR015331	138	684	Pfam	P22 tailspike C-terminal domain

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage L13 [NCBI]	1325963	Uroviricota > Caudoviricetes > Guernseyvirinae > Jerseyvirus L13 >
Host	Salmonella enterica subsp. enterica serovar Gallinarum [NCBI]	594	Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Genbank protein accession

AGK86482.1 [NCBI]

Genbank nucleotide accession

KC832325 [NCBI]

CDS location

range 2006 -> 4060
strand -

CDS

ATGTCCAGTGGTTGCGGTGATGTACTGTCACTTAACGATTTACAAATAGCCAAGAAACACCAGATTTTCGAAGCCGAGGTGATCACCGGCAAACAGGGCGGTGTAGCAGGCGGCGCAGATATCGACTACGCCACTAACCAGGTAACCGGGCAGACGCAGAAGACGCTGCCCGCGGTCTTGCGTGACGCCGGTTTCTCTCCGGCGTCTTTTAACTTCACAACCGGCGGAACCCTGGGAATTAACGACGCCAATAAAGCGGTTCTTTGGCCGAAAGAAGATGGCGGGGATGGTAACTATTACGCATGGCGTGGCTCCCTGCCGAAAGTTATCCCCGCGGCATCGACACCTCTTACGACAGGCGGCATTTCTGATTCGGCTTGGGTAGCTTTTGGGGACATCACCTTCCGTGCGGAAGCGGATAAGAAATTTAAGTACTCCGTTAAGCTGTCTGACTTTACTACGTTACAACAACTGGCGGATGCTGCCGTCGACAGTATTCTTATCGACCGTGACTACAATTTCAGCAATAACGAAACCGTTAATTTTGGCGGGAAGACCCTGACCATCGACTGTAAAGCGAAGTTTATCGGCGACGGAAACCTGGTATTTACGCAATTAGGTAAAGGTTCCATTGTAATAGCCCCCTTTATGGAGAGTGCTACAACGCCGTGGGTGATTAAACCGTGGACCGACGATAATCAGTGGATAACCGACCCCGCGGCAATCGTGGCCACACTTAAACAGTCTAAAACAGATGGATACCAGCCGACGGTAAACGATTACGCCAAGTTCCCTGGCATAGAATCCCTTCTCCCTCCGGAAGCTAAAGGGCAAAGCATATCTTCTACCCTGGAAATTCGGGAATGTACAGGCGTCGAGGTTCACCGGGCGAGTGGTCTTATGGCGTGTTTCCTGTTCCGTGGATGCCATTTCTGTAAGATGGTAGACGCTGACAACCCGAGCGGCGGTGCACACGGCGTAATCACCTTCGAAAACTTAAGCGGAGATTGGGGCAAAGGTAACTATGTTATCGGCGGGCGCACAAGTTACGGTTCGGTAAGTAGCGCGCAATTCTTACGCAACAATGGCGGTTTCGCGCGCGATGGCGGGGTCATCGGGTTTACCTCGTATCGTGCAGGGGAAAGTGGTGTTAAGACGTGGCAAGGTACGGTAGGTTCTACGACATCTCGTAACTACAACCTGCAATTCCGGGATTCGGCGGTACTGTACCCTGTATGGGACGGCTTCGATTTAGGCGCAGATACTGACATGAACCCCGAAGATGACCGCCCAGGGGATTTCCCCATTTCTCAGTACCCGGTACATATGCTCCCTTTAAACCATTTGATAGACAATCTATTTGTTAGAGGTTCGCTGGGGGTAGGATTCGGTATGGACGGGCAAGGTCTGTATGTCTCTAACATAACCGTCGAGGATTGCGCTGGTTCTGGGGCTTATATTCTTGCCCACGAAACAGTATTCACTAATATCGCAATAATCGACACCAATACTAAAAACTTCCCTGCGAACCAGATATATATCTCGGGGGCCTGTCGTGTAAACGGCCTTCGTTTGGTCGGCATCCGTTCAACTACCGAACAGGGCATGACGGTAGACGCACCTAACTCCACTGTAAGCGGAATAACGGGCTTCGTGGACCCCTCAAGGATTAACGTAGCCAATTTGATGGAGGAAGGTCTTGGTAACTCTCGCATAAACAGTTTCAATAATGATTCTGCGGCGCTTCGGTTTCGTATTCATAAACTGTCAAAAACCCTTGATAGTGGGTCCGTGTACTCCCACATTAACGGCGGGCCAGGTTCTGGCTCAGCATGGACCGAAATTACCGCTATTGCGGGGAGCTTGCCTGATGCCGTATCATTAAAAATAAATAGGGGCGATTATCGTGCTGTTGAGATACCGGTAGCGACGACCGTCCTACCAGACAACGCTGTCAGGGATAACGGGTCTATATCACTGTATCTGGAGGGCGATAGCCTTAAAGCGTTAGTTAAGCGGGCCGACGGAAGCTATACAAGATTAACTTTGGCATAA

Gene Ontology

	Description	Category	Evidence (source)
GO:0044423	virion component	Cellular Component	IEA:UniProtKB-KW (UniProt)
GO:0051701	biological process involved in interaction with host	Biological Process	IEA:UniProtKB-ARBA (UniProt)
GO:0019058	viral life cycle	Biological Process	IEA:UniProtKB-ARBA (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID: 42

Method: ESMFold

Resolution: 0,6898

Evidence: 0,7625

Literature

No literature entries available.