Protein

Genbank accession
AEC52970.1 [GenBank]
Protein name
collagen triple helix repeat domain protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MFDFPLSPVLNQVYTEGDRSWTWNGKSWVAIVSIGDQGEPGVQGPQGFQGNQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGNQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGSQGIAGSNGTQGPQGFQGVAGSNGTQGPQGFQGNQGTQGIAGTQGPQGFQGFQGSSGASGYTYSPTAPSSPNVGDEWTNSDDPRLPTYRYINDGNTTQWVELNASGESGPQGTQGVQGVQGTQGAQGPQGVPGSVMRLCIAASDESTALTTGNNRVRFRMPRAMTVTEVRATVNTAPTGSTLIVDINEGDTPVSILSTKISIDATEFSSVTAAVPPVISDTSLANDALISIDIDQIGATVPGAGLKVWIIGVEA
Physico‐chemical
properties
protein length:376 AA
molecular weight: 37914,57260 Da
isoelectric point:4,18570
aromaticity:0,06383
hydropathy:-0,42553

Domains

Domains [InterPro]

No domain annotations available.

Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CRM01
[NCBI] 		1026955 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AEC52970.1 [NCBI]
Genbank nucleotide accession
HQ615693 [NCBI]
CDS location
range 28846 -> 29976
strand +
CDS
ATGTTTGATTTTCCACTATCTCCGGTACTCAATCAAGTATACACTGAAGGTGACAGGTCATGGACCTGGAATGGAAAGTCTTGGGTTGCCATAGTAAGTATTGGTGATCAAGGAGAACCTGGAGTACAAGGTCCTCAAGGTTTTCAGGGAAATCAAGGTTCTCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGTTTTCAGGGAAATCAAGGTTCTCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGATTCCAGGGATCCCAAGGTATAGCTGGAAGTAACGGAACTCAAGGCCCACAAGGTTTCCAAGGTGTTGCTGGTTCTAACGGAACTCAAGGTCCTCAAGGATTCCAGGGAAATCAAGGAACTCAAGGTATAGCTGGAACTCAAGGCCCTCAAGGTTTTCAAGGTTTTCAAGGTTCTTCAGGTGCATCTGGATATACATATTCACCAACTGCACCATCTAGTCCAAATGTAGGTGATGAGTGGACAAATAGTGATGATCCAAGACTACCTACTTATAGATATATTAATGATGGAAATACTACACAATGGGTCGAACTAAACGCATCTGGAGAATCTGGACCACAAGGAACTCAGGGTGTTCAGGGAGTACAAGGAACTCAAGGAGCACAAGGTCCACAAGGCGTTCCAGGTAGTGTAATGCGTTTGTGTATTGCTGCCTCCGATGAATCCACTGCGCTAACTACGGGAAATAATAGAGTTAGGTTCAGGATGCCAAGAGCTATGACTGTTACGGAAGTTAGAGCAACGGTAAATACTGCACCTACTGGATCTACATTAATTGTAGATATCAATGAAGGAGACACACCAGTATCTATACTAAGTACAAAGATTTCAATCGATGCTACAGAATTTAGTAGTGTTACTGCTGCTGTTCCTCCAGTTATATCAGATACTTCATTAGCTAATGATGCGTTGATATCAATTGATATTGATCAAATTGGTGCTACTGTTCCCGGTGCTGGATTAAAAGTTTGGATAATAGGAGTTGAAGCATGA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.