Protein

View in Explore
Genbank accession
YP_004934698.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MRDLRPVSAPIHVLAAPQFDPGRGRITLDVPHGLTLAEIVARALPAATEADLARARVALVTERGTQIVPRELWALARPRPGVRVVIRITPGKGALRSILSIIVSVAAVALTGFLFPGFAVGSWQWGLAVAGFTIVGQLLINALIPPVKPDSEAKTTYAISGWRNRLEPGAAVPVVLGTMRYAPPFAATPYTEIVGDQQYMRAVFCLGEGEVAIDGMRLGETSLSEYDEVETEIRYGVAGELPLSLYPRQVVEEQIGVELTRPYPRDDAGNITQVSEEYEARRRVSDGDGGWIWETYTATRMVNAPTTATPVVRTTGPDAAGASIILAWTGGLFKYDDDGKRQPHGVSIRIEQRLIEAEEWQLVTQLDIVTTKAESFFRQHSWSFPSRGRWQVRLTMLQDEATDSKISQRTTWAALQTIRPEYPLAYPRPLALVALRIKATHQISGSIDNFNCLVSRICRDWDAASGVWVRRASENPAAAYLEVLTHASNPKAVADSGLDLDLLADWAEWCAAEGLTYNAVLEDQGTTLRDVLTEIAAAGRATPRHDGIRWGVVIDRPLVNTLIVDHINPRNSWGFKWSRAYRNPPHAFVVKFKDAGNDFKETERVVRWPGYTGEITMTEQLALPGKVHAAEVWREARRRQLEVLHRPDTYEVTQDGAVRTATRGDAIALSHDVLNRVQLAARVKSVDGAAVEIDDVVSMAAGETYAVRFRFFEAEDDTVGISVVRPVRTLPGETQILTLTGSGPMPIVGDLVHVGPARVESYTQIVTRIEATQDMCAIVRTVDAAPQIDTILAATPIPAWSSRVGAEIDDNLLQPSAPRFVALTSGLAATGLANRISYAVAPGTGSVPTIEIGLDHRISGAESWSSTTIPVANGGGTIDSYTPGQSVDLRARGIGATGVAGPWSATITIVVGSADAALPAALDASSISITTLLGGALIQFATGDDTATARVQIYRSITSLLDRETDAVGAPIAVEPGQSYATTLGDTTRTDLIVGGGLEAVGSWTLDAGWTISGGVATHAAGTASTLSQTVALTSGKYYRVSYDVIAVSGSTVQARLTGSTIRSGTAVSAAGAVFDRIQAVSGGTGIGIRAEASTIATIDNIRAYLETDACLAQGTHHIWIEPQNAAGVPGPVAGPFTIIVT
Physico‐chemical
properties
protein length:1142 AA
molecular weight: 122107,71030 Da
isoelectric point:5,40547
aromaticity:0,06743
hydropathy:0,01182

Domains

Domains [InterPro]
DC_0129
STR
8–1079
DC_0129
IPR055385
ATT
306–419
IPR055385
YP_004934698.1
1 1142
Architecture
STR
ATT
STR
STR 8-305 | ATT 306-419 | STR 420-1079 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhodobacter phage RcapMu
[NCBI] 		1105286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacter capsulatus SB 1003
[NCBI] 		272942 Bacteria > Proteobacteria > Alphaproteobacteria > Rhodobacterales > Rhodobacteraceae > Rhodobacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004934698.1 [NCBI]
Genbank nucleotide accession
NC_016165.1 [NCBI]
CDS location
range 33099 -> 36527
strand +
CDS
ATGAGGGATCTGCGCCCCGTTTCCGCCCCCATCCATGTGCTGGCGGCCCCGCAGTTCGATCCCGGCCGCGGGCGGATCACGCTTGATGTGCCGCATGGGCTGACCCTGGCCGAGATCGTCGCCCGGGCGCTGCCTGCGGCCACCGAGGCTGATCTGGCCCGCGCCCGGGTGGCGCTGGTGACCGAGCGGGGCACGCAGATCGTGCCGCGCGAGCTCTGGGCGCTGGCCCGGCCGCGGCCGGGGGTGCGCGTGGTGATCCGGATCACGCCCGGCAAAGGCGCCCTCAGGTCAATCCTGTCGATCATCGTTTCGGTCGCGGCCGTCGCGCTCACCGGGTTTCTGTTCCCCGGATTTGCGGTCGGGAGCTGGCAATGGGGGTTGGCGGTCGCGGGCTTCACGATTGTCGGCCAGCTGCTGATCAACGCTCTGATCCCGCCCGTCAAACCCGACAGCGAGGCCAAGACCACCTATGCGATCAGCGGCTGGCGCAATCGGTTGGAGCCGGGCGCCGCGGTGCCGGTGGTGCTGGGCACGATGCGCTATGCCCCGCCCTTTGCCGCCACGCCCTACACCGAGATTGTCGGCGATCAGCAATATATGCGCGCGGTCTTTTGCCTTGGCGAGGGCGAGGTGGCGATCGACGGCATGCGGCTCGGCGAAACTTCGCTCTCCGAATATGACGAGGTCGAGACCGAGATCCGCTATGGCGTTGCAGGGGAACTGCCGCTCAGCCTCTATCCGCGCCAAGTGGTCGAGGAGCAGATCGGCGTCGAGCTGACCCGGCCGTATCCGAGGGACGACGCGGGCAATATCACGCAGGTATCCGAGGAATATGAGGCCCGGAGGCGGGTCTCGGACGGCGACGGCGGCTGGATTTGGGAGACCTATACCGCGACCCGGATGGTCAACGCGCCGACCACGGCCACGCCCGTCGTGCGCACCACCGGCCCGGATGCCGCGGGCGCCAGCATCATCCTCGCCTGGACCGGCGGGCTGTTCAAATACGACGACGACGGCAAGCGGCAACCGCACGGCGTCTCGATCAGGATCGAGCAGCGGTTGATCGAGGCCGAGGAATGGCAGCTGGTGACGCAGCTCGATATCGTCACCACCAAGGCCGAGTCGTTTTTCCGCCAGCACAGCTGGAGCTTTCCCAGCCGTGGTCGCTGGCAGGTCCGCCTGACGATGCTGCAGGATGAGGCCACCGACAGCAAGATTTCCCAGCGCACCACCTGGGCCGCGCTGCAGACGATCCGGCCGGAATATCCGCTGGCCTATCCGCGGCCGCTGGCGCTGGTGGCGCTGCGGATCAAGGCGACGCATCAGATCAGCGGCTCGATCGACAATTTCAACTGCCTGGTGAGCCGGATCTGCCGCGACTGGGATGCCGCCTCCGGGGTCTGGGTGCGTCGCGCCTCGGAAAACCCGGCCGCCGCCTATCTGGAGGTGCTGACTCACGCGTCCAACCCCAAGGCGGTGGCCGATTCCGGCCTCGATCTCGACCTGCTCGCCGACTGGGCAGAATGGTGCGCGGCCGAGGGGCTGACCTATAACGCGGTGCTGGAGGATCAGGGCACCACCCTGCGCGATGTGCTGACCGAGATCGCGGCCGCGGGCCGGGCGACGCCGCGCCATGACGGCATCCGCTGGGGCGTCGTCATCGATCGGCCGCTCGTCAACACGCTGATCGTCGATCACATCAACCCGCGCAATTCGTGGGGGTTCAAGTGGAGCCGCGCCTATCGCAATCCGCCGCATGCCTTCGTGGTCAAGTTCAAGGACGCGGGCAACGACTTCAAGGAGACCGAGCGCGTCGTCCGCTGGCCCGGCTACACGGGAGAGATCACCATGACCGAGCAGTTGGCTCTGCCCGGCAAGGTGCATGCGGCCGAGGTCTGGCGCGAGGCGCGGCGGCGCCAGCTGGAGGTGCTCCATCGCCCCGACACCTACGAGGTCACCCAGGACGGCGCCGTGCGCACCGCCACTCGGGGCGACGCCATCGCGCTCAGCCATGACGTGCTCAACCGCGTGCAGCTTGCCGCCCGGGTCAAGTCGGTGGATGGCGCGGCGGTCGAGATCGATGACGTCGTCTCGATGGCCGCGGGCGAGACCTATGCCGTGCGGTTCCGCTTCTTTGAGGCCGAGGATGACACGGTGGGCATCTCGGTCGTGCGACCCGTCAGGACCCTGCCGGGCGAGACGCAGATCCTGACGCTGACCGGCTCCGGTCCGATGCCGATCGTCGGTGATCTCGTGCACGTCGGCCCGGCCCGCGTCGAGAGCTACACCCAGATCGTGACGCGGATCGAGGCGACGCAGGACATGTGCGCGATCGTGCGCACCGTCGATGCCGCGCCGCAGATCGACACGATCCTGGCGGCCACGCCGATCCCCGCCTGGTCGAGCCGCGTCGGGGCCGAGATCGACGACAACCTGCTGCAGCCCTCGGCCCCGCGGTTTGTGGCGCTGACCTCGGGCCTCGCCGCGACGGGTCTGGCCAACAGGATCAGCTATGCGGTCGCCCCCGGCACCGGGTCGGTGCCGACGATCGAGATCGGTCTGGATCACCGGATATCCGGCGCCGAGAGCTGGAGCAGCACCACGATCCCGGTGGCCAATGGCGGCGGCACGATCGACAGCTACACGCCCGGGCAGTCGGTCGATCTGCGTGCCCGCGGCATCGGGGCGACGGGCGTCGCGGGGCCATGGTCTGCGACGATCACGATCGTGGTCGGGTCGGCCGACGCGGCCTTGCCCGCCGCGCTCGATGCGTCCTCGATCTCGATCACGACGCTGCTGGGCGGGGCGCTGATCCAGTTCGCCACCGGCGATGACACGGCGACGGCACGGGTGCAGATCTACCGCTCGATCACCAGTCTGCTGGACCGCGAGACCGATGCCGTGGGGGCGCCGATCGCGGTCGAGCCCGGGCAGTCCTATGCGACGACGCTCGGCGACACGACCCGCACCGACCTGATCGTGGGCGGCGGGCTGGAGGCGGTGGGCTCCTGGACATTGGACGCCGGGTGGACGATCTCTGGCGGGGTTGCGACGCACGCTGCGGGCACGGCCAGCACGCTCTCTCAGACTGTCGCGCTGACGTCCGGCAAGTATTACCGAGTGAGCTATGATGTCATCGCGGTCTCCGGATCGACTGTGCAAGCGCGGTTGACCGGCAGCACGATCCGCTCGGGTACGGCGGTCTCAGCCGCAGGCGCTGTGTTCGATCGCATCCAGGCGGTCAGCGGTGGCACCGGCATCGGCATCCGGGCCGAGGCGAGCACGATCGCCACGATCGACAACATCCGCGCCTATCTCGAAACCGATGCCTGTCTGGCTCAAGGCACACATCACATCTGGATCGAGCCGCAGAACGCCGCAGGCGTTCCCGGCCCGGTTGCAGGCCCCTTCACCATCATCGTAACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e89d975e7c79f6a872167c98d3b107f36a54aac2d373f958b4d6d6178ae43a3d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8476
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50