Protein

View in Explore
Genbank accession
ARM70147.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
TSP
Evidence RBPdetect2
Probability 0,62
Protein sequence
MTTTANHSGILYLRNKNAEGVQLSYSRIYNEILGGTAYATIQVTREGGDTNYYQFDESGNAINYNTIAIGRGIINSLGSNSLVIGDSDTGFKQGGEGVLQVFCNGRNVALFDHQNLHLNGLLTIWPVDNNANGIRVSGSRTGSGNALIGGQVSGGAFVDWRDRAAGLLVELPSDGAASNVFKAVRWGYDWVAGLDVVRFNTGACEAHFNVRGAIYSFNDAGYASCVQWVSTSDIRLEANLKEIKSAREKVKSIKGYTYFKRSNLYEDEHSIYSEEAGVIAQDVQTVLPEAVYKVSNSEYLGVSYGGVTALLVNAFNEMSDQVDKQQEEIETLKSEIADLKAVVAALLNKRRWKH
Physico‐chemical
properties
protein length:354 AA
molecular weight: 38595,49900 Da
isoelectric point:5,47697
aromaticity:0,09605
hydropathy:-0,23955

Domains

Domains [InterPro]
DC_1202
STR
1–353
DC_1202
IPR030392
CHP
232–329
IPR030392
IPR030392
CHP
232–292
IPR030392 Coil
ARM70147.1
1 354
Architecture
STR
STR 1-353 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ARM70147.1
1 354
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1947
Central domain 11 209 200 0,2633
C-terminal 210 354 144 0,9831
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-354

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SE1Kor
[NCBI] 		2847282 Uroviricota > Caudoviricetes > Queuovirinae > Nonagvirus SE1Kor >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARM70147.1 [NCBI]
Genbank nucleotide accession
KY926791.1 [NCBI]
CDS location
range 57334 -> 58398
strand -
CDS
ATGACAACAACGGCCAATCATTCCGGCATTCTTTACCTTAGAAACAAGAACGCAGAAGGTGTGCAACTTTCATATTCAAGGATCTACAATGAAATTCTAGGTGGTACTGCTTATGCAACAATACAGGTAACAAGAGAAGGTGGAGACACAAACTATTATCAATTTGACGAAAGCGGAAACGCCATAAATTACAATACAATAGCAATTGGTAGAGGCATTATAAATTCACTTGGGTCTAATTCGTTAGTTATAGGTGATAGCGACACTGGATTTAAGCAAGGCGGCGAAGGAGTATTGCAGGTTTTTTGTAATGGTAGAAATGTTGCATTATTTGACCATCAAAACCTTCATCTTAACGGTCTTTTAACCATATGGCCTGTTGATAATAATGCAAATGGTATTAGAGTTTCAGGATCTAGAACTGGTAGCGGTAATGCTCTAATTGGCGGTCAAGTATCTGGAGGTGCTTTTGTTGATTGGAGGGACCGAGCGGCTGGTCTTCTTGTTGAGTTGCCAAGCGATGGTGCAGCATCAAACGTCTTTAAGGCCGTTCGGTGGGGTTATGATTGGGTTGCTGGTCTTGATGTTGTCAGATTTAACACTGGAGCTTGCGAGGCTCATTTTAATGTAAGGGGTGCGATTTACTCATTTAATGACGCTGGTTACGCCTCATGTGTTCAATGGGTCAGTACGTCAGATATTAGACTGGAAGCAAACTTGAAGGAGATTAAGAGCGCTAGAGAAAAAGTGAAGTCAATCAAGGGTTACACTTACTTTAAGCGCAGTAATCTTTATGAAGATGAACATTCTATATATTCGGAGGAGGCTGGTGTAATCGCTCAAGATGTGCAAACAGTTCTGCCGGAAGCGGTTTACAAGGTTTCAAATTCTGAATATTTAGGTGTTAGCTACGGCGGGGTTACTGCTCTTTTGGTTAACGCATTCAACGAAATGAGCGATCAAGTTGACAAGCAACAAGAGGAGATCGAAACACTGAAATCTGAAATTGCAGATCTTAAGGCGGTGGTAGCGGCGTTACTCAACAAGAGGAGATGGAAACACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
336719693476687f2e9f2475c26ee450de31d8e5c64130040a13437bc15cd436
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7311
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Lytic Bacteriophage SE1 Infecting Salmonella Enteritidis Isolates Kim,D., Kim,Y.J., Han,B.K. and Kim,H. 2012-09-15 — GenBank