Protein

View in Explore
Genbank accession
AAX07958.1 [GenBank]
Protein name
Orf630
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MKQAGMKITYAGVDITQWMYVQMVKRDVGTNHVNTMQKVGISDGQMLQYMSRDVKTIVVTGIVMNDDLVPLRRSLAAAIDTDEPQQLIFGDEPDKYYLAIVDSQPTFTEGFRSGTISISFICPDGGIAHSVATQTFDNMPYKDVPVNLLKGSGEPQTVAAHVWGDDPHLLLDTSSLKIGNTVSFQVKANGIKDTKVFVALNSQQISPLFSNGMETFTITWTKELSELPLPIKFSVKPSALTDKYTWSQAKAAIGTTASPWSPNPADPEYYTNTITVHNGGTYPVEPVIMATMHADNGFLGFANSQGGVLQFGNPEEIDGYTSEESEVALNLAAVKGSHMDNQAASNNLYWGDNPATRNEQIGNAIWTEDRYDGWKVEPNWPSITGDHKYWNGPSIKHNLARTHNGNFKSNLTWDVMTRFQTGVSKVGSLETTLESDGKPIFQMILKDNSALSDQIWWMCYYKNQLVVNEQLDRNIFTNDKFIQLELQKFGNSVVFRVSPWVGNRGRETTITRQFTFADAASVETKQFSAWFMRDKTWGESTMYLIASTVKWQNVSWYTDIRNRFSNGDVITIDVANTKTYFNGNEDRTLHTLGNQWDKFLLPPGDTIIQLMPSSWAQPFMCEVDLKEAWL
Physico‐chemical
properties
protein length:630 AA
molecular weight: 70677,70050 Da
isoelectric point:5,15964
aromaticity:0,10794
hydropathy:-0,36952

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–125
G3DSA:2.40.30.200 DC_0420
IPR006520
Unmapped
9–125
IPR006520 G3DSA:2.60.120.860
IPR008841
STR
34–122
IPR008841
DC_0259
STR
34–210
DC_0259
AAX07958.1
1 630
Architecture
ATT
STR
ATT 1-125 | STR 126-630
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus rhamnosus Lc-Nu-like prophage
[NCBI] 		313599 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AAX07958.1 [NCBI]
Genbank nucleotide accession
AY780364 [NCBI]
CDS location
range 6597 -> 8489
strand +
CDS
TTGAAACAAGCAGGCATGAAAATCACATATGCTGGAGTAGATATTACCCAGTGGATGTATGTGCAGATGGTCAAACGTGATGTAGGAACTAATCACGTCAACACAATGCAAAAGGTTGGGATTAGCGATGGTCAGATGTTGCAATACATGTCACGGGACGTCAAGACGATTGTGGTAACTGGTATCGTTATGAATGACGATTTGGTGCCACTGAGACGTTCCTTGGCTGCTGCTATTGATACGGACGAACCACAGCAACTAATCTTTGGTGATGAGCCGGATAAATATTATCTTGCCATCGTAGACAGCCAGCCTACCTTCACCGAAGGCTTTCGATCAGGGACAATCTCAATCAGCTTCATCTGTCCAGATGGTGGCATTGCGCACTCGGTAGCCACACAGACGTTTGACAATATGCCATACAAGGACGTTCCTGTTAATCTGCTGAAGGGAAGCGGCGAACCGCAAACAGTTGCGGCCCATGTGTGGGGAGACGATCCGCATTTATTGCTAGACACAAGTAGCCTAAAAATAGGCAATACTGTTTCTTTTCAAGTCAAAGCCAACGGGATTAAAGATACCAAGGTTTTTGTTGCTCTTAATAGCCAACAGATATCTCCCTTATTTTCAAATGGAATGGAGACTTTTACAATCACATGGACAAAAGAATTGTCCGAGTTGCCTTTGCCAATTAAATTTTCAGTTAAGCCATCAGCGCTAACAGATAAATACACTTGGAGTCAGGCTAAAGCAGCGATTGGCACCACAGCTTCTCCTTGGTCGCCTAATCCAGCGGATCCTGAATACTATACCAATACCATCACGGTGCACAATGGTGGCACTTATCCTGTCGAGCCAGTTATTATGGCAACTATGCACGCTGACAATGGCTTTCTAGGATTTGCCAATAGTCAGGGTGGCGTTCTTCAATTTGGCAACCCTGAAGAAATTGATGGCTATACCAGCGAAGAAAGTGAAGTGGCCTTGAATTTGGCAGCCGTTAAAGGCTCGCACATGGATAATCAAGCGGCTTCCAATAATCTTTACTGGGGAGACAATCCAGCTACGCGGAACGAACAGATTGGTAATGCGATTTGGACAGAGGACAGGTACGATGGCTGGAAGGTTGAGCCTAATTGGCCCAGCATTACTGGCGACCACAAGTATTGGAATGGGCCTTCAATCAAACACAACCTTGCTCGGACACATAACGGTAACTTTAAGAGCAATCTGACTTGGGATGTCATGACACGTTTTCAAACTGGTGTCTCAAAGGTTGGTTCGCTCGAAACAACATTAGAAAGTGATGGTAAGCCAATCTTTCAGATGATACTGAAAGACAATAGTGCACTGTCTGATCAAATATGGTGGATGTGTTACTACAAAAATCAGCTAGTTGTCAATGAACAGTTGGATCGCAATATCTTCACTAACGACAAGTTCATTCAGCTGGAATTGCAGAAATTTGGTAATTCGGTTGTTTTTAGAGTGTCACCATGGGTTGGCAATCGAGGACGAGAGACGACTATTACCCGTCAATTCACTTTTGCGGACGCTGCTAGTGTCGAGACCAAGCAATTTTCAGCATGGTTTATGCGAGACAAGACATGGGGCGAATCGACTATGTATCTAATTGCGTCTACCGTTAAATGGCAGAACGTAAGCTGGTATACAGATATTAGGAATCGCTTCAGCAATGGCGATGTAATTACAATTGATGTGGCTAATACCAAAACTTATTTCAATGGCAACGAAGATCGCACCTTGCATACATTAGGCAACCAGTGGGACAAGTTTCTTTTGCCACCCGGAGATACCATCATTCAGCTCATGCCATCAAGCTGGGCACAACCATTTATGTGTGAAGTTGATTTGAAGGAGGCATGGCTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
67f548079c0aa845aae5178f468fc7339332ab79c3d20932e241d91ab74c30d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8265
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Phage Lc-Nu-related sequence of Lactobacillus rhamnosus strain 1/3 Haapaniemi,K. and Alatossava,T. 2000-01 — GenBank