Protein

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Genbank accession
WGH49621.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MFKQYLDYVVGCLLRPSDDILTQDLTEEDEILDNNRLLRLLRTYKKDGTVGDLVFPCGKSLKALERPWLNNKKSESCIPEGLYAVALRNSPIVERTSKGKYKKGYEIVAVPDRTFIMFHIGNYVRNSDGCVLTGTDEGESNGIPAVWSSADAFDKFMSLMEKHKITHIHIEEQA
Physico‐chemical
properties
protein length:174 AA
molecular weight: 19746,35520 Da
isoelectric point:5,83307
aromaticity:0,08621
hydropathy:-0,38218

Domains

Domains [InterPro]
IPR043732
STR
35–161
IPR043732
IPR043732
STR
40–161
IPR043732
WGH49621.1
1 174
Architecture
STR
STR 35-161 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Alishewanella phage vB_AspM_Slicko01
[NCBI] 		3038238 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alishewanella sp. SMS8
[NCBI] 		2994676 Pseudomonadota > Gammaproteobacteria > Alteromonadales > Alteromonadaceae > Alishewanella >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49621.1 [NCBI]
Genbank nucleotide accession
OQ508956.1 [NCBI]
CDS location
range 62350 -> 62874
strand -
CDS
ATGTTTAAACAATATTTAGATTATGTAGTAGGTTGCTTATTAAGACCAAGTGATGATATACTTACACAAGACTTAACAGAAGAGGATGAAATTTTGGATAATAATAGATTACTTAGATTGTTGCGAACGTATAAAAAAGACGGTACTGTTGGGGATCTTGTATTCCCATGCGGTAAATCTTTAAAAGCCCTAGAAAGGCCGTGGTTGAATAACAAAAAATCAGAATCATGCATTCCAGAAGGTCTGTATGCGGTAGCATTACGAAACTCACCTATTGTCGAAAGAACTTCTAAAGGAAAATATAAAAAAGGCTACGAAATTGTTGCAGTTCCTGATAGAACGTTTATAATGTTTCATATTGGCAACTACGTTAGAAACTCTGATGGTTGTGTACTAACTGGCACCGATGAGGGAGAATCTAATGGTATTCCAGCAGTATGGTCATCAGCAGATGCGTTTGATAAATTCATGTCACTTATGGAAAAGCACAAAATCACCCATATTCACATCGAAGAGCAAGCGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
31ab585ec85a8bd01fcbd1ca5fc28abc776847c8953bcdef724eb3f5783ba698
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8060
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. 2023 — GenBank