Protein

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Genbank accession
YAF83070.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,75
Protein sequence
MVGALQDLYAIKHAADIKAGIAGIGVVEESLEAMKPRLSDRIFYALNKTGELVSQAVRVGRVTRRQKTGYNLNSWPQGKLCIDSNGRIYCGYNSAPSHGGSGTVPMITCSDDDGVSWSDPVQIVTGENYARGTDWWSLGVDDSNNLWGIVRSRGANNQVGVTFYNLYKSTDGGTSWVKVGEISSVTQVINDVSYVPELFHDMCYIPTTGRMVTGYHFANSSRVGFMSFDIIDPLNTIVTQDVIAHGEFSTLKYCEPTIAVEYTRNAEGTIYGGLRTQDNAYPSQLYFMNTDLTGFTRFNAPESVQYCPMTIRRINGQFVLLTIERYNTGAMNLWFGTPTDFYNMASSNFWKMPIGKIVDEVTVGASNVGVQDMEIHGDNLYFAWSSETKNTYADTYIGKMNMVYPASLINNEYLEGL
Physico‐chemical
properties
protein length:417 AA
molecular weight: 46256,45870 Da
isoelectric point:5,06466
aromaticity:0,11511
hydropathy:-0,21535

Domains

Domains [InterPro]
G3DSA:2.120.10.10
STR
59–402
G3DSA:2.120.10.10
IPR036278
STR
64–360
IPR036278
cd15482
ENZ
84–176
cd15482
YAF83070.1
1 417
Architecture
STR
STR 59-402 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YAF83070.1
1 417
Domain Start End Length (AA) Confidence
N-terminal 1 143 143 0,2722
Central domain 144 363 221 0,6522
C-terminal 364 417 53 0,5776
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-143
Central
144-363
C-terminal
364-417

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS_12
[NCBI] 		3459932 Viruses >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YAF83070.1 [NCBI]
Genbank nucleotide accession
PX000101.1 [NCBI]
CDS location
range 18440 -> 19693
strand +
CDS
ATGGTAGGAGCATTACAGGATTTATACGCTATTAAGCACGCAGCAGATATCAAAGCTGGGATTGCCGGTATAGGGGTTGTAGAAGAATCGTTGGAGGCCATGAAGCCAAGGCTCTCTGACCGCATTTTCTATGCACTGAACAAAACAGGGGAGTTAGTGAGTCAGGCTGTTCGTGTCGGGCGAGTCACTCGTAGGCAGAAGACTGGTTATAACCTGAACTCATGGCCACAGGGGAAACTCTGCATCGACAGCAACGGGCGGATTTACTGTGGTTATAACAGCGCACCATCCCACGGCGGTTCTGGCACTGTGCCCATGATAACGTGTAGTGACGATGATGGTGTAAGCTGGTCAGACCCGGTTCAGATTGTCACTGGTGAAAACTACGCTCGCGGAACGGACTGGTGGTCCCTCGGTGTTGACGACAGCAATAATCTGTGGGGTATAGTTCGCAGCCGAGGTGCAAACAATCAGGTTGGTGTAACTTTTTATAACCTGTATAAATCGACGGACGGCGGGACGTCATGGGTGAAAGTTGGAGAGATATCCTCAGTCACTCAAGTCATTAATGACGTTTCATATGTACCAGAACTATTCCACGATATGTGTTATATCCCAACCACTGGGCGCATGGTGACGGGTTATCATTTCGCTAACTCATCGCGTGTAGGTTTCATGTCGTTTGATATCATCGATCCGTTAAATACCATCGTGACGCAAGATGTTATCGCACATGGCGAGTTCTCTACGCTCAAGTACTGTGAGCCTACTATCGCCGTTGAATATACGCGAAATGCGGAGGGGACGATTTACGGTGGTCTCCGCACTCAGGACAACGCATATCCCTCGCAATTGTACTTTATGAACACGGACTTAACTGGTTTCACCCGGTTCAATGCCCCGGAGTCAGTGCAATACTGTCCTATGACGATTCGCCGTATCAACGGTCAATTCGTCCTGCTGACAATAGAGCGCTACAACACAGGGGCGATGAATTTATGGTTTGGGACGCCAACTGACTTCTACAATATGGCATCGTCAAATTTCTGGAAGATGCCTATTGGAAAAATCGTGGACGAGGTAACTGTTGGGGCTTCTAACGTTGGTGTACAGGATATGGAGATCCACGGCGATAATTTATATTTTGCATGGTCTAGTGAAACGAAAAACACATATGCAGATACCTACATCGGGAAAATGAATATGGTTTACCCGGCATCACTGATTAATAACGAATATTTGGAGGGTCTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
55ba5ac62b5746b86be4a47e745e728443e1a67e3179d72f17ecf4829f197a30
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of novel bacteriophages infecting clinical isolates of Serratia spp. and therapeutic efficacy in a Galleria mellonella model of infection Negus,D., Horton,M. and Hoyles,L. 2026-01-09 — GenBank