Protein

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Genbank accession
WBC28678.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MRLIAIAAIMIMLSGCAVSQQTPVPRIPFPAAEFAALPTKGTGTLTGQVFMKTVGGDVKFGAGSTVYLVPVTSYSKQWYEVNYIGGQALEAPDPRSGQGSITTVADGNGNFKFTDIPPGDYFLSSTVTWQAPSKYGLLPQGGVVAKVVSIADGVKLREMLTR
Physico‐chemical
properties
protein length:162 AA
molecular weight: 17077,52100 Da
isoelectric point:9,06743
aromaticity:0,09259
hydropathy:0,15988

Domains

Domains [InterPro]
PS51257
STR
1–16
PS51257 SSF117074
WBC28678.1
1 162
Architecture
STR
STR
STR 1-16 | STR 23-153 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Fyn8
[NCBI] 		3003696 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WBC28678.1 [NCBI]
Genbank nucleotide accession
OP966821.1 [NCBI]
CDS location
range 36582 -> 37070
strand -
CDS
ATGCGTTTAATCGCCATAGCAGCAATAATGATCATGCTGTCAGGTTGTGCCGTATCTCAACAAACGCCGGTCCCGAGAATTCCATTCCCTGCTGCTGAATTTGCCGCTCTTCCGACAAAAGGGACTGGCACATTGACTGGCCAGGTCTTTATGAAGACCGTTGGTGGAGATGTGAAATTCGGTGCAGGGAGCACAGTTTACCTAGTCCCCGTTACGTCCTATTCGAAACAGTGGTACGAAGTGAACTATATAGGAGGACAAGCGCTTGAGGCGCCAGATCCTCGATCAGGACAGGGGTCCATCACTACGGTGGCGGATGGGAACGGAAACTTCAAATTCACGGACATCCCGCCAGGCGACTACTTCCTCAGTTCAACCGTCACTTGGCAAGCGCCATCGAAGTACGGACTCCTCCCCCAAGGAGGCGTAGTGGCCAAGGTCGTGAGCATCGCTGATGGTGTGAAGCTTCGCGAGATGCTCACACGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3fdadcdc3fe0f5ef26b37206d403e5cb58c252dcb3357ece79deb58a64f57404
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9158
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of the lysogenic Pseudomonas bacteriophage Fyn8 Ostergaard,M.Z., Damgaard,A.S., Rosenbaek,E., Krogh,T.J. and Kirkpatrick,C.L. — — GenBank