Protein

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Genbank accession
XCH41990.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MALKTKIIVQQILNIDDITTTASKYPKYTVVLGTSISSITASELTAAVEASAASAAAAKDSEIAAKESETNAKDSENLSANYANSSEASATQSATSATEAERQAGLSKDSADASATSAEESKGFRDSAELAAQDAEQSRLLAEQAKKDAEAAKTAAATSEQNAAVSATESTNQATAATGSATKAGEYATTAKDSEIAAKTSELNAKDSEHESAISAEASEASASQSAISATQSAASATKSAESSAAAKTSETNAKTSETNAKTSETNAKTSETNAKTSETNAAAYAAAAKTSETNAAASAASASDSKGFRDEAEAFAAQASTSALAAKNSEINTKTSEINSKASEDAAKLAQQGALGSANTATQAMTTTKGYRDEAEGFKNTATTAATTATDKALEAAGSATMAGEKAIAATNAADRAEIAAASAEQVTQASLKKDQNLKDLTDKVAARKELQIQAVVSKDSNNVGDYNSFTSPNVVYELRLANDGGWRVARNSDNATSALPIGAGGTGAENVEGAKINFGIDRLKQTETETMMYAPGINSPYRITIRPDAAWGVWTDETGRWIPLSIDAGGTGSNTEVGARKNLNTPVGGQAIAIPDNSNILGFMSTYAESGYYSSGELVTYQPPEASGWWMYELHVHRKNANGHVEYGNIVATTMNGNKWGIICTNGSWGEWYRIARSDRQLMLLSPDAQSALGDYSIAIGDHDSGLKWDSDGHISAFADSARIFAWTPSGINTYGTISSYVGDNIRGMYVNGTRRGDPNALIAGQVEGGAFSAWRSRASGLLVEHTSFDSAVNVFKSVYWGKDWISGMDSVKWSSGGAEVHLYVGGAEYIFDAAGNGSAPNWVSRSDIRLKAHLKEIETASDKIDYLTGYTYYKRNNLIEDENSVYSIEAGLIAQDVERVLPEAVHSLNSDGKLDPKGEAIKGINYNGVVALLVNAFKEQKVKIDNQQEEINALRNELYELKNLVKSMLNGNAPTITELP
Physico‐chemical
properties
protein length:983 AA
molecular weight: 103147,53240 Da
isoelectric point:4,87829
aromaticity:0,06205
hydropathy:-0,44639

Domains

Domains [InterPro]
DC_0608
ATT
2–192
DC_0608 DC_0659 DC_0076 IPR030392
Coil
Unmapped
132–162
Coil DC_0415 DC_0613
IPR030392
CHP
849–909
IPR030392 Coil
XCH41990.1
1 983
Architecture
ATT
ATT
STR
STR
RBD
ATT 2-192 | ATT 210-277 | STR 278-491 | STR 520-700 | RBD 701-983
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCH41990.1
1 983
Domain Start End Length (AA) Confidence
N-terminal 1 514 514 0,7893
Central domain 515 759 246 0,4471
C-terminal 760 983 223 0,8358
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-514
Central
515-759
C-terminal
760-983

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PMBT22
[NCBI] 		3153513 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCH41990.1 [NCBI]
Genbank nucleotide accession
PP810245.1 [NCBI]
CDS location
range 20417 -> 23368
strand +
CDS
ATGGCACTTAAAACTAAAATTATTGTACAGCAGATTCTGAACATAGATGACATTACAACTACTGCTAGTAAATATCCTAAGTACACAGTAGTTTTAGGTACTTCTATTAGTTCTATTACTGCTAGCGAACTAACAGCGGCTGTTGAGGCCTCTGCTGCTTCTGCTGCGGCAGCAAAAGATTCTGAAATTGCAGCAAAAGAATCTGAAACAAATGCTAAGGACTCTGAGAACCTATCTGCAAATTATGCTAACTCTTCAGAAGCTTCTGCAACTCAATCTGCTACTTCTGCTACTGAAGCGGAGAGACAAGCTGGTTTATCTAAAGATAGTGCTGATGCCTCTGCTACTTCAGCAGAAGAATCCAAGGGGTTCCGTGATTCTGCTGAACTTGCTGCACAAGATGCTGAACAGAGTCGTCTGCTAGCTGAACAAGCTAAGAAGGACGCTGAAGCTGCTAAGACTGCTGCTGCTACTTCTGAGCAAAATGCTGCTGTATCCGCTACTGAATCTACTAATCAGGCTACTGCTGCTACTGGTTCTGCTACAAAGGCGGGAGAATACGCTACTACTGCAAAAGATTCCGAGATAGCGGCTAAGACTTCAGAACTTAATGCTAAGGATTCTGAGCATGAATCTGCTATTTCTGCTGAAGCTTCTGAAGCTTCTGCTTCTCAATCTGCTATTTCTGCTACTCAATCTGCTGCGTCCGCTACTAAATCTGCAGAATCATCAGCTGCAGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAAACTAATGCAAAAACTAGTGAGACTAACGCAAAAACTAGTGAGACTAATGCAGCAGCATATGCAGCAGCAGCAAAAACTAGCGAGACTAATGCTGCTGCTTCCGCTGCCTCTGCTTCTGACTCCAAAGGATTCAGGGATGAAGCAGAAGCATTCGCTGCACAAGCCTCCACATCAGCATTAGCAGCAAAAAACTCAGAAATTAATACAAAGACTAGCGAAATTAACTCAAAAGCTAGTGAAGACGCTGCTAAGCTAGCTCAGCAAGGTGCATTAGGTAGTGCGAATACAGCTACGCAAGCGATGACCACAACCAAAGGCTACAGAGACGAAGCAGAGGGATTTAAAAATACCGCCACTACTGCTGCAACGACAGCAACAGACAAGGCCCTGGAGGCTGCTGGTAGTGCTACAATGGCAGGAGAGAAAGCAATTGCAGCTACCAATGCAGCTGACAGAGCGGAAATAGCAGCTGCATCGGCAGAACAGGTTACGCAAGCGTCGTTGAAGAAGGATCAGAACCTTAAAGACCTTACTGATAAAGTTGCTGCAAGGAAGGAACTTCAAATTCAAGCGGTAGTGAGCAAGGACTCTAATAATGTGGGTGATTATAACTCATTCACCAGCCCCAATGTAGTATATGAACTTAGACTGGCTAATGATGGCGGTTGGCGTGTTGCAAGAAATAGTGATAATGCTACATCGGCTCTTCCTATTGGTGCTGGCGGTACTGGTGCGGAAAACGTTGAGGGCGCAAAAATAAACTTTGGCATTGATCGTTTAAAGCAAACAGAAACAGAAACTATGATGTACGCACCAGGGATTAACTCACCTTATCGAATCACAATTAGACCTGATGCGGCGTGGGGTGTTTGGACTGATGAAACTGGAAGATGGATTCCTCTTTCAATTGATGCTGGCGGCACTGGATCTAATACTGAAGTTGGCGCAAGAAAGAACTTAAACACTCCTGTTGGTGGTCAAGCAATTGCCATCCCGGATAATTCAAACATTCTTGGGTTTATGTCAACATACGCAGAAAGCGGTTATTACTCAAGCGGAGAACTTGTTACATATCAACCACCTGAAGCCTCTGGTTGGTGGATGTATGAATTGCATGTTCACCGTAAAAATGCAAACGGCCATGTTGAGTATGGAAATATTGTTGCAACCACAATGAACGGCAATAAATGGGGTATCATTTGCACTAATGGCTCTTGGGGTGAATGGTACAGGATAGCAAGATCTGATAGGCAATTGATGTTATTAAGTCCTGATGCTCAATCAGCTCTTGGTGATTACTCTATAGCAATTGGTGATCATGACTCTGGTTTGAAATGGGATAGTGATGGTCACATAAGCGCGTTTGCTGATTCAGCGAGAATATTTGCATGGACTCCATCAGGTATAAATACTTACGGGACCATATCCTCTTATGTTGGGGATAATATAAGGGGCATGTATGTAAATGGGACTAGGCGTGGAGATCCAAACGCGCTTATTGCTGGTCAAGTTGAGGGTGGTGCTTTTAGTGCGTGGCGTAGTCGTGCGTCTGGTTTGTTGGTAGAGCATACTAGTTTTGATTCGGCTGTCAACGTATTTAAATCTGTTTATTGGGGTAAGGATTGGATATCGGGAATGGATTCTGTTAAATGGTCCTCTGGAGGTGCTGAGGTTCATCTTTATGTTGGTGGAGCTGAGTATATTTTTGATGCCGCTGGTAATGGTAGCGCCCCAAACTGGGTTAGTAGATCTGATATTAGATTGAAAGCGCATTTAAAAGAAATTGAAACCGCATCTGACAAAATTGATTATCTAACTGGTTATACTTACTACAAACGCAATAATCTAATTGAAGATGAAAACAGCGTTTATAGTATTGAGGCTGGATTGATTGCTCAAGATGTTGAAAGGGTTTTGCCTGAAGCGGTTCATTCTTTGAATAGTGATGGTAAGCTAGATCCAAAAGGTGAGGCAATCAAAGGTATTAACTATAATGGTGTTGTCGCACTTCTTGTTAACGCATTCAAAGAGCAAAAAGTAAAGATTGATAATCAACAGGAGGAAATTAACGCATTACGCAACGAGTTATATGAACTGAAAAACCTTGTAAAATCAATGCTTAACGGAAATGCTCCAACAATTACAGAACTACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
93a50af4b0aaaa408499170c0558f5ee3bbb6ec67fe23977d4e4ee08eb79136c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5873
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
This phage originates from the Bacteriophage catalogue of the Bacteriophage Competence Centre, Department of Microbiology und Biotechnology, Max Rubner-Institut, Kiel, Germany Sprotte,S. and Brinks,E. 2020-12-18 — GenBank