Protein

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Genbank accession
UYD59773.1 [GenBank]
Protein name
long-tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MATQFMAHLGPSYVETSHLSENNAVKYKLEALGSNADSTVKVPFIKLNGASRLSGYSRGINAVTISPTGVASNQAAFDLYTRPEHFETLRSYLMSAPSNNIVVLVTHDAIKSTEAFDEFMYQYGSRSWPGVPYLNKVLPDSRLYRSSYVAIFNTSLKRFCYENFVGNDYTAASDTSAYLEVVFDTVEDIGACGTPERKVDDINEHFSRPDDYAFIRYFPTENITNWEAVYHVKCELYNDQVLKDANGHARLYLWTQNSGGTWFSQMILSNADGAVGQWNTYEGYFKLPAAGGGATLWGCQAYRWPSSAKVGLAGARNVIVTRVTRDDDDKVENAAFGVNGMRANTLSDNGNFSNPVMQLLNLKPKNVVTSNELRERT
Physico‐chemical
properties
protein length:377 AA
molecular weight: 41961,28830 Da
isoelectric point:5,70251
aromaticity:0,11936
hydropathy:-0,35729

Domains

Domains [InterPro]
DC_0912
STR
1–377
DC_0912
PS52031
LEC
23–198
PS52031
IPR039477
STR
58–116
IPR039477
UYD59773.1
1 377
Architecture
STR
STR 1-377
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYD59773.1
1 377
Domain Start End Length (AA) Confidence
N-terminal 1 167 167 0,0055
Central domain 168 366 200 0,2312
C-terminal 367 377 10 0,9360
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-167
Central
168-366
C-terminal
367-377

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage avDM5
[NCBI] 		3101603 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYD59773.1 [NCBI]
Genbank nucleotide accession
OP380602.1 [NCBI]
CDS location
range 168354 -> 169487
strand +
CDS
ATGGCGACTCAATTTATGGCCCATCTCGGGCCATCTTATGTTGAAACTAGCCACCTAAGCGAAAACAACGCGGTTAAGTATAAGTTGGAAGCCCTTGGCTCTAATGCAGACTCAACTGTAAAAGTCCCGTTCATTAAGTTGAACGGGGCAAGTCGCTTATCGGGATACAGTCGTGGCATAAATGCGGTCACAATAAGTCCTACCGGTGTAGCTAGCAACCAGGCAGCTTTTGATTTGTACACGCGACCGGAGCACTTCGAGACGCTCAGGTCATATTTGATGTCTGCGCCGTCAAATAACATTGTTGTCCTGGTGACACATGATGCAATTAAATCTACTGAAGCATTTGACGAATTCATGTACCAATATGGCTCTCGCTCATGGCCAGGCGTCCCTTATCTGAATAAGGTATTGCCGGATTCTCGGTTGTATAGGAGTTCGTATGTTGCTATTTTTAATACGTCTCTTAAGCGTTTTTGCTATGAGAATTTCGTTGGAAATGATTACACGGCAGCATCGGATACCTCCGCGTATCTTGAGGTAGTTTTTGATACTGTTGAAGATATTGGCGCCTGTGGAACGCCTGAACGTAAAGTTGATGATATCAATGAACATTTCAGCCGTCCAGACGATTATGCTTTCATCAGATATTTCCCAACTGAAAATATAACCAATTGGGAAGCAGTCTATCATGTTAAATGCGAGTTATACAACGATCAAGTTCTAAAAGATGCAAATGGACATGCCCGGCTCTATCTATGGACACAAAATAGCGGTGGCACTTGGTTTTCGCAAATGATATTGTCAAACGCTGACGGTGCTGTTGGTCAATGGAACACATATGAGGGGTATTTCAAACTACCAGCGGCAGGCGGCGGTGCTACATTATGGGGCTGCCAGGCATACAGATGGCCGTCCAGCGCTAAAGTTGGTTTAGCTGGCGCTCGAAACGTCATAGTTACCCGAGTAACTCGAGATGACGATGACAAAGTTGAAAATGCTGCTTTTGGTGTTAACGGCATGAGAGCGAACACATTGTCTGACAATGGAAACTTCTCAAACCCTGTAATGCAACTGCTTAATTTGAAACCGAAAAACGTTGTTACTTCGAACGAACTTCGGGAACGTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
40b26a4c8b153e36fd290d6e5402b0a34477fea8994d0b9f58893591b63656c9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6232
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
On Diversity and Genetic Richness: Insights on Aeromonad Phage Diversity through Physicochemical and Molecular Analysis Papa,D.M., Rousseau,G., Tremblay,D., Labrie,S., Gutierrez,T.A., Ramos,J.D. and Moineau,S. 2024-03-24 — GenBank