Protein

View in Explore
Genbank accession
ARB12085.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MKLNITAPGLFFNRGGDRVTVDQIVLENSAGAVVSFPVKGRIWKMYRGAYRPREFKIWTAAGKFYAGEQSRSPWDIVGEVVADDVRPVYWQDLTDDQKAQAAAKYHNGEGTPEDYFTYTPDQFIVINGDVYDLDADAAVYEVEGLKGHVRLLESSKADGAALAVQCVDGWQVISVYRVQVAS
Physico‐chemical
properties
protein length:182 AA
molecular weight: 20216,42690 Da
isoelectric point:4,92632
aromaticity:0,12088
hydropathy:-0,24670

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage ST-374
[NCBI] 		1897741 Uroviricota > Caudoviricetes > Casjensviridae > Chivirus ST101 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ARB12085.1 [NCBI]
Genbank nucleotide accession
KX765864.1 [NCBI]
CDS location
range 3044 -> 3592
strand -
CDS
ATGAAACTAAATATCACCGCGCCGGGCCTGTTCTTTAATCGTGGCGGCGACCGCGTCACCGTGGATCAAATCGTTTTAGAGAATAGCGCCGGGGCCGTCGTGTCATTCCCTGTTAAGGGCCGGATCTGGAAAATGTACCGGGGCGCATACCGTCCGCGCGAATTCAAGATCTGGACGGCGGCGGGCAAGTTTTACGCGGGCGAACAATCCCGATCGCCGTGGGATATTGTCGGCGAGGTTGTCGCGGACGATGTGCGCCCGGTCTACTGGCAAGATCTGACCGATGACCAGAAAGCGCAAGCCGCCGCCAAATATCACAACGGGGAAGGCACGCCGGAAGATTATTTCACCTATACGCCGGATCAATTCATCGTGATAAATGGCGACGTTTACGATCTGGACGCCGACGCGGCCGTTTATGAGGTGGAAGGGTTAAAAGGTCATGTGCGTTTACTGGAAAGCTCAAAGGCGGACGGGGCCGCGCTGGCGGTGCAATGTGTGGACGGCTGGCAGGTCATAAGCGTTTACCGCGTACAGGTGGCATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e2dee9d906ef7f23acd5688feb20373cdaea8c6e9cc1cbc9d6901acfc5172159
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8336
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of Salmonella SPN-19 and related bacteriophages from Thailand Korbsrisate,S., Supokaivanich,R., Taharnklaew,R. and Ong,C. 2020-12 — GenBank