Protein

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Genbank accession
WPK38388.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,58
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDVWVETETYPVGALVKVNADNMLYRCLVQNINMPPSANPTQWRPVLDLTAATAAARQVGKASGNVIQVGAFGLGGNAEVVTNVNSIVNDGIYQLPASGTGGPTNGVETEILHINWDAKNASQWGRTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTASELGINQDFIPMDGSDSIRGNLGTVGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVVTAARWGSVPMSHIQHILTAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGDKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47299,46550 Da
isoelectric point:6,60483
aromaticity:0,07883
hydropathy:-0,17860

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV127
[NCBI] 		3077272 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK38388.1 [NCBI]
Genbank nucleotide accession
OR352957.1 [NCBI]
CDS location
range 33252 -> 34586
strand +
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGTGGCTGGGGTGCAACCCTTGGCTACTCGGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATTGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAGGGTGTTGACGTATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTATACCGTTGTCTGGTGCAGAACATTAATATGCCACCGTCTGCTAACCCTACGCAGTGGCGCCCTGTACTCGACCTGACTGCAGCAACTGCTGCAGCACGACAGGTTGGTAAAGCTTCTGGTAACGTAATCCAGGTCGGTGCATTTGGCTTAGGTGGCAACGCTGAGGTAGTTACTAATGTTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCGTCAGGTACTGGCGGACCTACTAACGGCGTTGAGACTGAGATTCTGCATATCAACTGGGATGCGAAAAACGCTTCACAGTGGGGACGCACCAAGGGTAAGCGCGTAATAGCCATGCGCGAGAAGGTTAACAATACCTGGGGCGGATGGTCATACTCTTACGGGCCTGACAATAAGCCTACTGCCTCTGAGCTGGGTATTAATCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGCGGCAACTTAGGTACTGTTGGCTGGCTGCATATTGCGCGTACTACTTCCGACTTGCTACGCGCTGCTAACTCCGCCGGCGTAGGTACTGTTGAGTACTCCGGTAACATTGCAGGCGGTACTGCTGTTCAGGAATTGCTGACTTCGGTTTCTGTTGCGGCTAACAGTAACGTTGTCACTGCGGCTCGCTGGGGTTCTGTGCCTATGTCACATATCCAGCACATTCTTACGGCAGGTGGTGCCACCCAGATTAACATGGCAGTGTGTCGTCCTGGCGGTATTGCCGACCGTCGTACAGTAGCTTTGCAGGTAGACGGTCTTAATAGCAGAGTAACTACCACAAACAGCTTTATTTTATGCGAAAATGGTGTTAGAGTATACTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTTGGTGCTCGTATTGCTGCTGGCGTATCCGAGTCAACGTTCTACCCGGGGCATGTAATGACTGGCTGGCGCTTCGGTGATAAGAAAGAGTTGCGTGGTGGCACATACTGGTCAGCGCCGTTACAGTATTACATTAACGGCACTTGGATTAACGTAAGCAACGTATCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7f77057c46c5fc12bc4917532bcdbfb4d5d6fbdbe8bffcb950d9f3f816c2bee1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6705
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank