Protein

View in Explore
Genbank accession
AUR87026.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSYGPNQMYPGATELDPNYPKDKFKDNNPSTTNNGTPLKAIKENQDLTLETAVMNDAGFEYNGLPDTPQDSQLFKAYKASIGNGANLLSNHNFLVQTPDDSQPLPSATPTSYPPGYQIFSGVFANETTGITNLTYIDGRVSFSGGDLYFAVPNAGGVERLTEFAASVADFDGKPRTRGVSFALVGDEYRVTVGIDALEDVSANPTPIGSVKFEQGSVATGHDVCMSINEVFKQSKNYYIDVSNYPDVKGDLSVDCSAGFKAAYDHAVSLGFDLFIPATYMGGYFIKDIEMAGVASGYSKGIKVFGGGIVNSLGAVATVVHPKENSAFISREIGDSFDNLCFRNWTGKAGVTIQSVDIPGRSLVLATNPWELSGGAPITWDHTITSTDGTTYSNFLQFAAYGSWVSDTVVVNGDGTVTISNIKGSNGTLDSDFLSGLATSIERFSSYAHFETVPIDGLLNELGSIHLDIAENSIFNKLWFTQVRKAFSHDLGSGAGPNVNIGNLGLYSNIIVDGANDFMTGVDLRGSSQESLHGGQFSNVQFFSCRRAFNGRRLENLTFASCVFNYSQTLFRATDAYNLQWTGGEIGWGTGTGNIENVVEIPGQCFGLNINGAKWGRHATGNVLKLGQVRDLNLSGNNHQSISESNVVGNEFLVVTDFINSSYIGGNSISNEFPSSDYMTADFTALNALSKISDTNFAQPIQAFGASDVIADLSSGTSVYQFMYSLAKFKDGGSAAFEDVNSGYVSVSNKNIHKYGGTLNPSVVFTMPNFNATPNSAEQIILDFSAVNFNGQFIAVNSSGGSAITTVSAQGVVTLTKLANSFIATT
Physico‐chemical
properties
protein length:825 AA
molecular weight: 88064,43840 Da
isoelectric point:4,67236
aromaticity:0,10909
hydropathy:-0,12618

Domains

Domains [InterPro]
DC_0205
STR
1–824
DC_0205
AUR87026.1
1 825
Architecture
STR
STR 1-824 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR87026.1
1 825
Domain Start End Length (AA) Confidence
N-terminal 1 255 255 0,8150
Central domain 256 707 453 0,9879
C-terminal 708 825 117 0,9720
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-255
Central
256-707
C-terminal
708-825

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.093.O._10N.286.55.E10
[NCBI] 		1881399 No lineage information
Host Vibrio sp. F12
[NCBI] 		2070776 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87026.1 [NCBI]
Genbank nucleotide accession
MG592467.1 [NCBI]
CDS location
range 33256 -> 35733
strand +
CDS
ATGAGTTACGGTCCTAACCAAATGTATCCGGGCGCTACGGAGCTCGATCCGAACTATCCAAAGGATAAGTTCAAGGATAACAACCCATCAACGACCAATAACGGCACTCCGTTAAAGGCCATCAAAGAAAACCAAGACCTTACACTTGAAACGGCCGTTATGAATGACGCTGGCTTTGAGTACAACGGGCTACCTGACACGCCTCAAGATTCCCAACTATTCAAGGCTTACAAAGCATCGATTGGTAATGGCGCAAACCTGCTATCAAACCACAACTTTCTAGTTCAGACTCCGGACGACTCACAGCCGTTACCTAGCGCTACGCCAACAAGTTACCCGCCGGGTTATCAAATATTTTCTGGTGTTTTTGCCAATGAAACAACCGGCATCACAAATCTGACTTACATTGATGGCCGCGTATCGTTCAGTGGTGGTGACTTGTATTTTGCTGTGCCGAATGCTGGTGGTGTTGAGCGCTTAACAGAGTTTGCAGCATCGGTTGCTGACTTTGACGGAAAACCACGCACGCGCGGCGTGTCATTTGCTTTAGTTGGTGATGAGTATCGCGTGACGGTTGGCATTGATGCGCTTGAGGATGTTAGCGCTAATCCAACTCCGATTGGCTCTGTTAAGTTTGAGCAGGGTTCGGTTGCCACTGGGCATGATGTATGCATGTCAATTAATGAGGTGTTCAAACAATCAAAAAATTATTACATAGACGTATCAAACTATCCTGATGTTAAGGGTGATCTATCTGTTGATTGCTCCGCTGGGTTTAAGGCAGCTTACGACCATGCAGTATCTCTTGGGTTTGATCTTTTTATACCTGCTACCTACATGGGTGGTTATTTCATAAAAGACATTGAGATGGCTGGAGTTGCTTCTGGCTACTCTAAGGGAATTAAAGTATTTGGCGGCGGAATAGTAAATTCTCTTGGAGCTGTGGCAACGGTAGTGCACCCGAAAGAAAACTCAGCTTTTATATCTAGAGAGATTGGCGACTCGTTTGATAACTTGTGCTTTAGAAATTGGACGGGTAAGGCAGGAGTGACCATTCAGTCAGTAGATATCCCAGGGAGATCACTCGTACTCGCGACAAATCCGTGGGAACTTTCAGGTGGAGCTCCTATAACATGGGACCACACGATAACATCAACCGATGGAACTACTTATTCAAACTTCCTGCAATTCGCTGCATACGGCTCTTGGGTTTCAGATACCGTAGTTGTTAATGGTGACGGCACTGTTACCATATCGAACATAAAAGGTAGCAACGGAACGTTAGACTCTGATTTTTTGAGCGGTTTGGCAACGTCAATAGAAAGATTTTCATCATACGCCCACTTTGAGACAGTTCCTATTGACGGTCTTTTAAATGAGCTTGGTTCTATTCATCTCGATATCGCGGAAAATTCTATCTTCAACAAACTGTGGTTTACTCAGGTTAGGAAAGCGTTCAGTCACGACTTAGGCTCAGGTGCAGGGCCAAATGTTAACATCGGAAACTTAGGCTTATATAGCAACATAATTGTTGATGGTGCTAACGACTTCATGACAGGCGTCGATCTAAGGGGGTCTAGCCAAGAAAGCCTACACGGCGGGCAGTTCTCTAATGTGCAATTCTTCTCATGTCGAAGAGCATTTAACGGTAGAAGACTTGAAAACCTTACGTTCGCATCTTGCGTGTTTAACTACTCACAAACACTATTTAGAGCAACAGATGCGTACAATTTGCAATGGACTGGCGGCGAGATTGGCTGGGGGACTGGTACAGGTAATATAGAAAATGTTGTTGAAATACCGGGGCAGTGTTTTGGTTTGAATATAAATGGAGCCAAATGGGGAAGGCACGCAACAGGAAACGTACTTAAACTAGGACAGGTTAGAGACCTTAATCTTAGCGGGAATAATCACCAATCAATCTCAGAGTCTAATGTTGTTGGTAATGAGTTCCTTGTTGTGACTGACTTCATCAACAGCTCGTACATAGGAGGAAACTCGATAAGTAACGAGTTTCCATCTTCTGACTATATGACTGCCGATTTTACTGCGTTGAATGCTCTGTCTAAAATATCTGACACTAACTTTGCGCAGCCAATACAGGCATTTGGAGCGTCTGATGTTATTGCTGATCTATCGTCAGGAACTTCAGTTTATCAATTTATGTACAGTCTCGCTAAGTTTAAAGATGGGGGTTCAGCAGCCTTTGAGGATGTTAATTCGGGCTACGTTTCGGTTTCAAACAAAAATATTCATAAATATGGCGGAACCTTAAACCCGTCAGTGGTATTTACAATGCCAAACTTTAACGCGACACCAAATTCAGCCGAGCAAATTATTTTGGACTTCTCAGCGGTGAACTTTAACGGACAGTTTATCGCCGTAAACTCAAGCGGTGGATCTGCAATAACTACAGTATCAGCACAGGGAGTCGTTACATTAACAAAACTTGCAAATAGCTTTATTGCAACCACTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3d37b38606a58255944064f29b51f6dd87fcc646404bb7bb6b0e0f32d767ae91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5930
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank