Protein

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Genbank accession
UCR81424.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MGKVSGSYGSVVRGVSEQVPQDRRPGQHFEQLNMISDPVRGLARRHGSLLQDEFAVRAYDQGIWDAMVADTARHKEFTFFVDGTEFALVHRTTASPTPEVTGLSFAWCFNKDARKFIPIVYASGDPVLEQLRSGGVSAAVNVGRYIYLAGNDITPRWTPNSKFDNPTNKSKLVFWVRGGTYSTKFTATLVRADGSKVTATYKTKASSYPGLLDTSDLSSSDPDYQKKVLDRTNAYNSAVTAWIGEAAADATAENIANKLAQSFQSQGVSGVNVINSTVIVDNTQFVEASGDDGGDGTLLRAVGNEVTALDLVSTVHYGGKVVKVRPKKQSGEDAFYLQAELKEGNGPWGEVSWKETSGYEMQPVEVFVQGTVVNGTLYLASSAAKLTEIAGGVHPGYKANVVGDDISCPLPYFFGKRIDYLGMFQDRLVIGSGATLFFSRPGDYFNWFRTSVLTVDDRDPIEMYALGSEDDTIKTSTTYDRNILLFGKRMQYTVNGRQPLTPKSASIVILSAHEDAIDADPQNSGNFVFYGKWRNGMSSLHQIQMGMLADSPESFNVSQQLDQYLQGKPVQIVALTSPNTVILRTDASRNTLYTYAYLDTPAGSERLFDAWSKWTWDETLGVVTAIARHDGDILSFCLRRGVDRSGVNRIWLAADRFVLDTQLSDLPYADSLRPATDALNPGPNAFINTASTQFDDVGVAVFNRSHQYGFLGSTFGKLDEFTEQYGMGALPSMTVGVMYPSCVTPTNPYVLDRNEKAIVNGRLTLGRIGVSVTDTGGMTCDVEDNNGTRRTLDFNGRLLGRASNPIGRQPIVTTSVNATIGKEVRECKYTLSAKTWLPLTITAIEWTGQFFNNARRV
Physico‐chemical
properties
protein length:857 AA
molecular weight: 93890,14590 Da
isoelectric point:5,74485
aromaticity:0,10035
hydropathy:-0,27515

Domains

Domains [InterPro]
IPR058003
TTP
1–51
IPR058003 IPR058003
DC_0058
STR
1–857
DC_0058
UCR81424.1
1 857
Architecture
STR
STR 1-857
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UCR81424.1
1 857
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,9393
Central domain 164 373 211 0,2900
C-terminal 374 857 483 0,2276
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-373
C-terminal
374-857

Taxonomy

  Name Taxonomy ID Lineage
Phage Brevundimonas phage BC
[NCBI] 		2880898 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Brevundimonas sp.
[NCBI] 		1871086 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UCR81424.1 [NCBI]
Genbank nucleotide accession
OK335783 [NCBI]
CDS location
range 25228 -> 27801
strand +
CDS
ATGGGCAAAGTCTCTGGTTCCTACGGCAGCGTAGTCCGGGGTGTATCGGAGCAGGTCCCACAGGACCGTCGCCCCGGCCAACACTTCGAGCAACTGAACATGATCTCGGACCCCGTGCGCGGCCTCGCTCGCCGCCACGGGAGCCTCCTGCAAGATGAGTTCGCCGTGCGCGCTTACGACCAAGGCATCTGGGATGCTATGGTTGCTGATACCGCCCGGCACAAGGAGTTCACCTTCTTCGTTGACGGCACCGAGTTCGCCCTTGTCCACCGCACGACTGCCAGCCCGACCCCCGAGGTCACAGGGCTCAGCTTCGCGTGGTGCTTCAACAAGGACGCGCGCAAGTTTATTCCCATCGTTTACGCCTCTGGCGATCCGGTCCTTGAGCAGCTTCGCTCGGGCGGGGTCAGCGCAGCGGTCAACGTGGGCCGCTACATCTACCTCGCGGGTAACGACATCACCCCGCGCTGGACGCCGAACAGCAAGTTCGACAATCCGACCAACAAGTCCAAGCTGGTCTTTTGGGTCCGGGGTGGCACCTACTCGACCAAGTTCACGGCTACTCTCGTGAGGGCTGACGGGAGCAAGGTTACGGCCACCTACAAGACCAAGGCCTCGTCCTACCCCGGCCTGCTCGATACGTCGGACCTGTCGTCTAGCGACCCCGACTATCAGAAGAAAGTGCTGGACCGCACCAACGCCTATAACTCCGCCGTAACGGCATGGATCGGCGAAGCTGCGGCGGACGCTACGGCAGAGAACATCGCCAACAAGCTGGCGCAGAGTTTCCAGAGCCAAGGCGTCTCGGGCGTCAATGTGATTAACTCCACGGTCATCGTGGACAACACCCAGTTCGTTGAAGCCTCTGGCGACGACGGTGGGGACGGGACGCTTCTGCGCGCGGTCGGCAATGAAGTTACGGCTTTGGACCTCGTGTCCACGGTTCACTACGGCGGCAAGGTCGTCAAGGTGCGACCGAAGAAGCAAAGCGGCGAAGACGCCTTCTACCTGCAAGCTGAACTGAAAGAGGGCAATGGTCCTTGGGGTGAGGTCAGTTGGAAGGAAACCTCGGGCTACGAAATGCAGCCCGTCGAAGTCTTCGTTCAGGGCACCGTTGTGAACGGGACGCTTTACCTCGCATCCTCGGCTGCAAAGCTGACGGAGATCGCAGGTGGGGTTCACCCCGGTTACAAGGCCAACGTGGTGGGTGACGACATTAGCTGCCCGCTGCCCTATTTCTTCGGTAAGCGCATCGACTACCTTGGCATGTTCCAAGACCGTCTGGTGATCGGCTCAGGGGCTACCCTGTTCTTCTCGCGGCCCGGCGACTACTTCAACTGGTTCCGCACGTCTGTCCTCACTGTGGACGACCGCGACCCGATTGAAATGTATGCCCTTGGCTCCGAGGACGACACGATCAAGACCTCGACCACCTACGACCGGAACATTCTGCTGTTCGGCAAGCGTATGCAATACACCGTCAACGGGCGGCAACCGCTTACGCCTAAGAGCGCCAGTATCGTCATCCTGTCCGCACACGAGGACGCCATCGACGCTGACCCACAGAACAGCGGGAACTTCGTCTTCTACGGCAAGTGGCGCAACGGTATGTCCAGCCTCCACCAAATCCAAATGGGGATGCTGGCCGACAGCCCGGAAAGCTTCAACGTCTCGCAACAACTGGACCAATACCTTCAAGGTAAGCCGGTTCAGATCGTGGCGCTGACCTCTCCGAACACGGTGATCCTACGCACGGACGCCAGCCGGAACACGCTCTACACCTACGCCTACCTCGACACGCCTGCGGGCAGCGAGCGTCTGTTCGACGCTTGGTCCAAGTGGACGTGGGACGAGACGCTGGGCGTCGTTACCGCCATCGCGCGGCACGACGGGGACATTCTGTCCTTCTGCCTGCGGCGCGGCGTGGATCGCTCTGGCGTCAACCGCATCTGGCTGGCTGCGGATCGCTTCGTTCTGGACACCCAGCTTAGCGACCTCCCGTATGCCGACAGTCTGCGGCCTGCTACGGACGCGCTGAACCCCGGACCCAACGCCTTCATCAACACGGCCTCGACGCAGTTCGATGACGTGGGCGTGGCGGTCTTCAACCGGAGCCACCAATACGGCTTCCTCGGCTCTACGTTCGGCAAGCTGGATGAGTTCACCGAGCAATACGGCATGGGTGCCCTTCCGTCTATGACGGTCGGCGTCATGTATCCTAGCTGCGTCACCCCGACGAACCCCTACGTTCTGGACAGGAACGAGAAGGCCATCGTCAACGGGCGTCTCACGCTTGGGCGCATCGGCGTCTCGGTCACGGACACGGGCGGCATGACCTGCGACGTGGAGGACAACAACGGCACACGCCGGACCTTGGACTTCAACGGGCGGCTGCTTGGCCGGGCCTCGAACCCAATCGGGCGACAGCCCATCGTTACCACGTCTGTCAATGCCACTATCGGCAAGGAAGTCCGCGAGTGCAAATACACGCTCTCGGCTAAGACGTGGCTCCCCTTGACCATTACCGCTATCGAGTGGACTGGTCAGTTCTTCAACAACGCACGGAGGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2eee54aa99238a783dbf399b3f3fe88aa1a29470910f89ead1f604e1805f0907
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3064
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
New Genera and Species of Caulobacter and Brevundimonas Bacteriophages Provide Insights into Phage Genome Evolution Ely,B., Hils,M., Clarke,A., Albert,M., Holness,N., Lenski,J. and Mohammadi,T. 2024 — GenBank