Protein

View in Explore
Genbank accession
AXC33163.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTTTIIKGRGKGGSNQTRTPVEAPDSIQSIARAKVLIALGEGEFAGGLDGKSIFLGDSSSYTPLQNADGSYNFNNVKYEFRSGTQDQDYIQGFPGIENELQVSYELKQAVPYVRAVSNTQLSALRIRLGWPTLLLQKNNGDKVGTRVEYAIDLSVDGGPYETVVNGAVDDKTTSLYERSHRVNLPKASTGWQLRVRRITPDSTSVNIVDTMRVVAVTEIIDAKLRYVNTALLYVEFDAKQFPNGIPQVVCNPKGRIIRVPDTYDPETRTYSGTWEGVFKWAWTDNPAWIYYDIILNERFGLGQRIDATQIDKWELYRIAQYCDQLVPDGKGGSGTEPRFRCNVYIQDRNDAWTVLRDLAGIFRGMTYWGDNKMYVLADMPRDVWHIYNHASVVEGKFTFADPSETTRNTAALVNWSDPANHYKDTPEPVYDNDLAMRFDYRQLEMTAIGCTRQSEANRRGRWALLTNGIGEVVTFSTGMDVPPVGEVIGVAANELAGRTIGGRVSAVNGRNITLDRAADVKAGNRLFLNLPSGTAQARTVQAVNGNTVTVTTPYSETPEAECNWGVDSDDLFIALFRVTGTRDNNDGTFEVTGTTYNPDIYSAVDTGARLDERPVSVIPPGVQAPPGDIVVDSYSTVNQNIAITTMRVAWDAVQGAVAYEAEWRRDSGNWVSVPRTSSLGFEVQGIYSGRYLVRVRAVNASDVSSVWATSSEVNLTGKVGNPPKPVGFIASDNVVFGIELSWGFPANTDDTLKTEIQYSLTGTEDDAMLLADVPYPQRKYQQMGLKAGQIFWYRAQLVDRSGNESGYTEWVRGQASIDVSDVTDAILEEIKESDTFKDLIESAVGSSEKFAELADAIKENANGLAAAVGSNKQTAEAIIGNALAIADVVVRQTAQQGANSATFEQLREVIATETEARVTDVTRLEAKTAQNEAGITDVRQALATETEARASAVSQLTAATQVASDKADSAAAVGAQNTASITDLSQVVTDLDSSMASRLEELGAQTDKASGGIQSNSIALITSTLAQVDQQVRLSAQYGDSKASIDRIDNVMASDREATARSLLSLQTDVNGNKAAINSLNQTFSNYQQATATQINDITATINGHTSAISTNAQAIANVSGDLKAMYSIKVAVDANGKQYAAGMGIGVENTPSGMQSQVLFLADRFAVMAQAGGAVTLPFVIQNGQVFIRETFIQDGTIGNAKIGSYIQSSTWDGTGNVGWHINKSGYATFNNVTVRGSIYATNGNFSFNGSGNTTVINGNGVTINIPGGGRIVLGTWT
Physico‐chemical
properties
protein length:1279 AA
molecular weight: 138296,09010 Da
isoelectric point:4,83748
aromaticity:0,07975
hydropathy:-0,27576

Domains

Domains [InterPro]
DC_0023
STR
1–1278
DC_0023
IPR053171
Unmapped
6–1260
IPR053171
IPR055385
ATT
97–222
IPR055385 IPR032876 IPR013783 IPR003961 IPR015406
IPR003961
STR
625–713
IPR003961
IPR003961
STR
625–719
IPR003961
IPR036116
STR
625–707
IPR036116
AXC33163.1
1 1279
Architecture
STR
ATT
STR
ATT
STR
STR 1-96 | ATT 97-222 | STR 223-346 | ATT 347-481 | STR 482-1278 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC33163.1
1 1279
Domain Start End Length (AA) Confidence
N-terminal 1 484 484 0,8647
Central domain 485 1208 725 0,0918
C-terminal 1209 1279 70 0,7454
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-484
Central
485-1208
C-terminal
1209-1279

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AsXd-1
[NCBI] 		2182324 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC33163.1 [NCBI]
Genbank nucleotide accession
MH178096.1 [NCBI]
CDS location
range 21002 -> 24841
strand -
CDS
ATGACGACGACAATCATCAAAGGCCGCGGCAAAGGTGGCAGCAACCAGACCCGAACGCCTGTTGAGGCACCGGACAGCATTCAGTCCATTGCCAGGGCAAAGGTGCTGATTGCGCTTGGAGAGGGTGAGTTCGCTGGCGGGCTTGATGGTAAAAGCATTTTTCTTGGTGACTCATCTTCATACACGCCTCTTCAGAACGCCGACGGAAGTTATAACTTCAATAATGTGAAATATGAGTTCCGTTCCGGTACTCAGGACCAGGACTACATTCAGGGCTTCCCCGGCATTGAAAACGAACTTCAGGTTTCATACGAGCTGAAACAGGCTGTGCCGTACGTGCGCGCGGTATCCAACACGCAGCTCTCTGCGCTGCGAATTCGCCTGGGATGGCCAACTCTTTTACTCCAGAAAAACAACGGTGATAAAGTCGGCACCCGCGTCGAGTATGCTATCGATCTGTCGGTCGATGGCGGGCCGTATGAAACGGTGGTTAACGGTGCTGTTGATGACAAAACCACGTCGCTTTATGAGCGCAGTCACCGCGTCAATCTTCCGAAAGCCTCGACTGGATGGCAGTTGCGGGTTCGCAGAATCACGCCGGATTCCACGAGCGTGAATATCGTCGACACCATGCGCGTTGTGGCCGTTACTGAAATTATTGACGCCAAACTTCGCTACGTTAACACAGCGCTGCTGTATGTAGAGTTTGACGCAAAGCAGTTCCCTAATGGCATTCCTCAGGTTGTGTGCAATCCGAAAGGGCGAATCATCCGTGTACCTGATACTTATGATCCCGAAACCCGCACTTATTCTGGTACATGGGAGGGCGTATTTAAATGGGCGTGGACGGATAACCCTGCCTGGATTTATTACGACATCATTCTGAACGAGCGCTTCGGGCTGGGTCAAAGAATCGATGCGACTCAGATAGACAAATGGGAACTTTATCGCATCGCCCAGTATTGCGATCAACTGGTACCAGACGGCAAGGGCGGCAGCGGTACGGAGCCTCGTTTTCGTTGCAACGTTTATATCCAGGACCGTAATGACGCCTGGACCGTACTTCGTGATCTGGCGGGTATATTTCGCGGCATGACGTACTGGGGCGACAATAAGATGTATGTCCTGGCTGATATGCCACGGGATGTGTGGCACATCTATAACCACGCCAGCGTTGTTGAGGGTAAATTTACCTTTGCGGACCCGAGTGAAACCACACGAAACACTGCCGCGCTGGTGAACTGGTCAGACCCAGCCAACCACTATAAAGACACGCCTGAGCCTGTTTACGATAACGATCTGGCCATGCGCTTCGATTATCGTCAGCTCGAAATGACTGCGATCGGCTGCACCAGGCAGTCAGAGGCAAACCGGCGGGGGCGCTGGGCGCTACTCACTAACGGTATCGGCGAGGTGGTGACCTTCAGCACGGGTATGGACGTTCCACCTGTCGGGGAGGTGATCGGCGTGGCTGCTAACGAGCTGGCCGGAAGAACTATCGGCGGCAGGGTGAGTGCGGTTAACGGCCGCAACATAACCCTCGATCGCGCCGCTGATGTGAAGGCCGGGAACCGGCTGTTTTTGAATCTTCCATCAGGCACAGCTCAGGCCAGAACCGTCCAGGCCGTTAACGGAAACACAGTCACTGTCACCACACCCTACAGCGAAACGCCGGAGGCTGAATGTAACTGGGGTGTGGACTCTGACGATCTGTTTATAGCGCTTTTCCGTGTTACGGGAACGCGGGACAACAACGACGGCACTTTCGAAGTCACCGGGACGACTTACAACCCTGACATCTATTCCGCCGTTGATACCGGCGCAAGACTTGACGAGCGGCCAGTCAGTGTCATTCCACCTGGGGTTCAGGCTCCACCAGGAGATATTGTCGTAGACAGTTACTCTACGGTTAACCAGAACATTGCGATTACCACCATGCGCGTTGCCTGGGATGCTGTTCAGGGTGCAGTTGCATACGAGGCGGAATGGCGGCGTGACAGCGGCAACTGGGTAAGCGTGCCCCGAACATCTTCTCTCGGTTTCGAAGTTCAGGGGATCTACTCAGGTCGTTATCTGGTTCGCGTCAGGGCGGTGAACGCCAGCGACGTTTCATCGGTGTGGGCGACATCATCAGAAGTAAATCTTACGGGTAAAGTGGGCAATCCGCCGAAACCGGTCGGCTTCATCGCTTCTGATAATGTGGTTTTCGGTATCGAGCTGAGCTGGGGATTCCCGGCGAACACCGACGACACGCTGAAGACGGAAATTCAGTACAGTCTGACCGGGACGGAAGACGATGCGATGCTGCTGGCCGATGTGCCTTACCCGCAGCGCAAATATCAGCAGATGGGCCTTAAGGCTGGGCAGATTTTCTGGTACCGCGCGCAGCTGGTGGACCGCAGCGGCAACGAATCAGGTTACACAGAATGGGTGCGAGGACAGGCCAGCATCGATGTATCCGATGTCACCGATGCTATCCTGGAGGAGATTAAAGAGAGTGATACGTTCAAAGACCTGATCGAGAGCGCGGTGGGGAGCAGTGAAAAGTTCGCAGAACTGGCTGATGCAATCAAAGAGAATGCAAACGGTCTTGCAGCTGCGGTTGGATCGAATAAGCAGACAGCAGAAGCAATCATCGGCAACGCGCTTGCTATTGCTGATGTTGTCGTGCGGCAGACAGCCCAGCAGGGCGCTAACTCTGCGACCTTCGAACAGCTCCGGGAGGTGATCGCCACTGAGACGGAGGCACGCGTCACGGATGTTACTCGTCTAGAAGCGAAAACCGCCCAGAATGAAGCGGGTATTACTGATGTTCGCCAGGCGTTAGCAACGGAAACTGAAGCTCGCGCTTCTGCGGTAAGTCAATTGACGGCTGCCACTCAGGTCGCATCTGACAAAGCTGATTCAGCAGCTGCTGTAGGTGCTCAGAATACAGCATCAATCACTGACCTTAGCCAGGTTGTCACGGACCTCGATTCCTCAATGGCATCACGCCTGGAAGAGCTGGGTGCACAAACTGATAAGGCCAGCGGCGGCATTCAGAGTAACTCCATCGCGCTAATAACGAGTACGCTGGCGCAGGTTGATCAGCAGGTGAGACTCAGCGCGCAGTACGGTGATAGTAAGGCCAGCATCGATCGTATTGATAATGTTATGGCAAGCGACAGGGAGGCAACAGCGCGTTCGCTGCTGAGTTTGCAGACTGACGTGAACGGCAACAAGGCAGCAATCAACAGCCTGAACCAGACGTTTTCCAATTATCAGCAGGCCACGGCCACGCAGATAAACGACATCACGGCGACCATCAACGGGCACACTTCAGCGATCAGCACTAACGCTCAGGCGATAGCAAACGTTAGTGGTGACCTGAAGGCGATGTACAGCATCAAGGTTGCCGTGGACGCGAATGGAAAGCAGTATGCCGCCGGAATGGGGATCGGTGTAGAAAACACTCCATCGGGCATGCAGTCGCAGGTGCTGTTCCTGGCGGATCGCTTCGCCGTCATGGCGCAGGCGGGGGGAGCGGTTACACTGCCGTTCGTTATCCAGAACGGGCAGGTGTTTATCCGGGAAACCTTCATTCAGGACGGCACCATCGGCAACGCCAAGATCGGCAGCTATATCCAATCTTCAACCTGGGACGGCACCGGGAACGTTGGCTGGCACATCAACAAATCTGGCTACGCGACGTTTAACAACGTGACCGTTCGCGGCTCGATTTACGCCACAAACGGTAATTTTTCTTTCAATGGCTCCGGCAACACAACGGTGATTAATGGTAATGGCGTAACCATTAATATTCCGGGTGGCGGCCGCATCGTACTGGGGACGTGGACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61199a3762ed723f9cdecfa46ed81054db539be4430b96b9080aa8a9356dff5b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7244
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of bacteriophage AsXd-1 Ting,W., Fei,M.Y. and Quan,L. 2018-08-10 — GenBank