Protein

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Genbank accession
AYP28294.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MYDGDFSSLLKSKLGAALIGLLNGGSVQDAIHYVTPEMFGAKGDYVIGSPGTPGTGTDDTAAFQAAIDQAIAKGYQEVRCSAKKYLITGTLNLGGTGTGVVAAIPGAVGVRLVGQGYDNTTLYFRSATDTTPLIALRGGSGYHTPRSVNRMTLHPTSDRLYKGYGVLLEGACFSMNYDVAIMKFQVGVHYYNSTRPGTFTEFNCFINPRFHRNIVAELFEVNGGDNSFHGNDIFGGQFQIKTNQDLGDGNTVPGIGIELRGSATTPAYLYNAKINTHFFGGPGAVGIKVTRANTDNITGCIQAEGSLILQSPDGSPFEMKGGLYSIASVTFEVSAEPVGKAAAFIFENRISNTAPFTSPRLPGLNPTQIPLYLADTTDAGGRVGLFRAIGTGIDSPYISAAGTAGNGVYFGYTAAGLNLQGFVPGLKIAYDGGTITSYAASFIIANATTGMRMTANSFEPQTDNSMSSGSNSFRYTTVYAVNSTISTCDAERKTEPRDPTEVEMDAFYEVSQLPWVWQWLERFQTEGDGARVHSGPTVQAAIAVMTNHGLDWKTYSAFCYDEWESKPEEIDQNTGDTIPAVEAGHVYSFRKEELLLWITRAIIHRQKRIEERLSALESK
Physico‐chemical
properties
protein length:619 AA
molecular weight: 66545,71950 Da
isoelectric point:5,40041
aromaticity:0,10501
hydropathy:-0,17593

Domains

Domains [InterPro]
IPR011050
STR
26–285
IPR011050 IPR044914 IPR030392
DC_0783
STR
30–576
DC_0783
IPR012334
STR
36–354
IPR012334 IPR036388
cd10144
CHP
489–605
cd10144
AYP28294.1
1 619
Architecture
STR
RBD
STR 26-576 | RBD 577-615 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYP28294.1
1 619
Domain Start End Length (AA) Confidence
N-terminal 1 45 45 0,9703
Central domain 46 355 311 0,9846
C-terminal 356 619 263 0,9078
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-45
Central
46-355
C-terminal
356-619

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaA_3M
[NCBI] 		2419930 Uroviricota > Caudoviricetes > Pantevenvirales > Miltonvirus > Miltonvirus 3M
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYP28294.1 [NCBI]
Genbank nucleotide accession
MH929319.1 [NCBI]
CDS location
range 34148 -> 36007
strand +
CDS
GTGTACGATGGGGATTTTTCTTCCCTTCTAAAGAGCAAACTCGGGGCTGCTCTCATTGGGTTGTTGAACGGTGGGAGCGTTCAAGACGCTATCCATTATGTGACCCCAGAGATGTTCGGGGCAAAAGGGGACTACGTGATCGGTTCCCCTGGAACCCCTGGAACAGGCACGGACGATACTGCTGCTTTCCAGGCGGCTATAGACCAAGCTATCGCAAAGGGCTATCAGGAAGTCCGTTGTAGTGCTAAGAAATACCTTATAACGGGCACATTAAATCTTGGGGGCACTGGTACAGGCGTCGTCGCTGCTATCCCAGGGGCTGTCGGGGTGAGACTGGTCGGCCAGGGATATGACAACACGACATTGTATTTCAGGTCGGCTACAGACACCACCCCCCTGATCGCACTTCGAGGCGGTTCTGGTTACCACACACCGCGATCTGTAAACCGCATGACGTTGCACCCCACTTCAGACCGACTGTACAAAGGTTACGGCGTTTTGCTGGAAGGGGCGTGTTTCTCCATGAACTACGACGTTGCTATAATGAAATTCCAAGTCGGGGTACATTATTATAACAGCACCCGACCTGGCACGTTTACTGAGTTCAACTGCTTTATCAACCCACGTTTCCACAGGAACATCGTTGCCGAGTTGTTTGAAGTGAACGGTGGCGACAATAGCTTCCATGGGAACGATATTTTTGGGGGCCAATTCCAGATAAAAACAAACCAGGATCTCGGAGACGGAAATACTGTCCCCGGTATTGGTATCGAACTGAGAGGCTCGGCCACTACACCAGCATACTTGTACAACGCCAAGATCAACACACACTTCTTTGGCGGGCCGGGCGCTGTTGGTATCAAGGTCACCAGGGCCAACACCGACAACATCACTGGATGTATCCAGGCAGAAGGCTCGCTTATTCTTCAAAGTCCAGACGGATCCCCGTTTGAGATGAAAGGCGGGTTGTACAGCATCGCGAGTGTCACGTTCGAAGTGTCTGCTGAACCTGTTGGGAAGGCTGCTGCTTTCATATTTGAAAACCGGATCAGCAACACTGCGCCGTTTACCTCCCCGAGACTGCCGGGACTTAATCCAACCCAGATCCCTCTGTACCTGGCTGACACTACTGACGCGGGCGGCAGAGTGGGGCTATTCCGGGCTATCGGTACGGGAATAGACAGCCCCTACATCTCGGCAGCTGGAACTGCCGGTAATGGTGTCTATTTCGGTTACACTGCAGCCGGGCTAAACCTCCAGGGCTTTGTACCTGGTTTGAAGATCGCATATGACGGCGGTACGATAACCAGTTATGCTGCCTCGTTTATCATTGCCAACGCCACTACCGGCATGAGGATGACGGCCAACTCGTTTGAACCACAGACCGACAACTCTATGTCCAGTGGCTCCAACAGTTTCCGTTACACCACAGTTTACGCGGTCAACAGCACCATCTCTACCTGTGACGCAGAGCGCAAAACTGAACCTCGTGACCCGACTGAGGTTGAAATGGATGCGTTCTATGAAGTGTCCCAGTTGCCGTGGGTGTGGCAATGGCTGGAACGGTTCCAGACCGAGGGTGATGGTGCACGTGTTCACTCAGGCCCGACGGTTCAGGCAGCAATAGCCGTCATGACTAACCATGGTTTAGATTGGAAAACCTATTCCGCATTCTGCTACGACGAATGGGAATCCAAGCCAGAAGAGATTGACCAGAACACTGGTGATACCATACCAGCAGTTGAGGCAGGGCATGTCTATTCCTTCAGAAAAGAAGAGCTGTTGCTGTGGATCACGCGGGCTATAATCCACCGCCAAAAACGAATTGAAGAACGGCTGAGTGCATTGGAGTCAAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c21b94338d964e172692f14d560777e7e82156df4d860685a6597124f3433925
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6923
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50