Protein

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Genbank accession
UAW59379.1 [GenBank]
Protein name
putative tail structure protein
RBP type
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MATTYLTLTNSVLRELNETELTSSTFSSSRGIQTAIKDFINKGIHDIYNETGEIPLLYARTTQDLTVGDNEYSFPTDFRKADMDSFTMGPKEVVTNGEFTSNINSWTTGDGSPSYTSSGNGRLNLNSSAAYQAINTTVNKTYKLQVRVLSPNSSSTGLIVRVGTSAGGTQNLDTTKAVTNFREGAILNTTFTATAQVSYIYLEASGVQLDVDYVRISRSDIAHRKLTFISYDNYLQGYKSTDDTNNSGSYSAPLRVYILPDYATFGVSPRPNTSEYTISYNYYTTHTDLSAHGDNMSLPDRFRTLIVDRAKYYTYMLRSDPQHAQLADRDFQRKLRLLKVDYATKNDYMRTDTIGESIATNIGGRVS
Physico‐chemical
properties
protein length:367 AA
molecular weight: 40861,65820 Da
isoelectric point:5,99301
aromaticity:0,10354
hydropathy:-0,50027

Domains

Domains [InterPro]
IPR056209
STR
3–124
IPR056209 IPR056209
IPR008979
STR
89–195
IPR008979
G3DSA:2.60.120.260
STR
91–217
G3DSA:2.60.120.260
G3DSA:2.60.120.260
STR
91–215
G3DSA:2.60.120.260
cd02795
Unmapped
107–216
cd02795
IPR056209
STR
181–340
IPR056209
UAW59379.1
1 367
Architecture
STR
STR 3-340 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC033P
[NCBI] 		2873403 No lineage information
Host Candidadtus Pelagibacter sp. HTCC1062
[NCBI] 		198252 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UAW59379.1 [NCBI]
Genbank nucleotide accession
MZ892993 [NCBI]
CDS location
range 40145 -> 41248
strand -
CDS
ATGGCAACAACTTACCTAACACTAACGAATAGCGTACTTCGAGAATTAAACGAAACTGAGTTAACCTCTAGTACGTTTAGTTCTAGTAGAGGTATACAAACTGCAATTAAAGATTTTATTAATAAAGGTATTCATGATATTTATAATGAAACTGGAGAGATACCTTTACTATACGCAAGAACTACACAAGATTTAACTGTAGGTGATAACGAATATTCTTTCCCCACAGATTTTAGAAAAGCAGATATGGATTCATTTACTATGGGTCCTAAAGAAGTAGTTACTAATGGTGAGTTTACATCTAATATAAATAGTTGGACTACTGGAGATGGATCACCATCTTATACTTCTAGTGGTAATGGTAGATTAAATTTAAATAGTTCAGCAGCATATCAAGCTATTAATACTACAGTAAATAAAACTTATAAATTACAAGTTAGAGTTTTAAGTCCAAATAGTTCTAGCACTGGATTAATTGTTAGAGTTGGAACATCTGCAGGTGGAACACAAAATTTAGATACCACAAAAGCTGTAACTAATTTTAGAGAAGGTGCTATATTAAATACTACCTTTACAGCTACAGCACAAGTATCATACATTTATTTAGAAGCATCTGGTGTACAATTAGATGTAGATTATGTAAGAATATCTAGAAGTGATATTGCACATAGAAAATTAACTTTTATATCTTATGATAATTATTTACAAGGATATAAGTCAACAGATGATACAAATAATAGTGGTAGTTATTCAGCACCATTAAGAGTTTATATATTGCCAGATTACGCAACATTTGGTGTAAGCCCAAGACCAAATACAAGTGAGTATACTATAAGTTATAATTACTATACTACACACACAGATTTATCTGCACATGGTGATAATATGTCATTACCTGATAGATTTAGAACATTAATTGTAGATAGAGCTAAGTATTATACTTATATGCTTAGATCAGATCCACAACATGCACAATTAGCAGATAGAGATTTTCAAAGAAAACTAAGATTATTAAAAGTAGACTATGCTACTAAAAATGATTACATGCGAACTGATACTATAGGAGAAAGTATTGCTACAAATATAGGAGGTAGAGTAAGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a1135a7831156915fe764df42cbbd8b8454bf08df71251319184f91054ccf517
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8865
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Newly identified HMO-2011-type phages reveal genomic diversity and biogeographic pattern of marine HMO-2011-type group Qin,F., Du,S., Zhang,Z., Ying,H., Wu,Y., Yang,M. and Zhao,Y. 2022-01-12 — GenBank