Protein

View in Explore
Genbank accession
AET72639.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSTVRVNQIEASSEHDYAIEMDATTDINVAGTYENNPSKKLVIPSGTEAQRPGIPQIGMMRHNTESNAAEVYDGTGWIDFIGGAGIGTSNVTGDGTSVENAAFSATALKEEYPSTTSGAYYYKIPGTNNVKRLWTDFSNDGGNWVIVSKWGGHSKNTTNVYDAAERNVSNLAVSTLDGYADFSRLSRDDMNAIWQDSRFVVRIHFKNDDATATSGIYFQKKLNRQREMDFWRAHYHPLQWSNGITNSYQATGGGTNYQVSFAVANTNPEISNYSGTTNFQPATDNVAGGSGYNANMGWWDRGHVTAPNFGVIEISRHMGFFGDINQGNQWIFTGATDSRFNNNENRRSIVLLRW
Physico‐chemical
properties
protein length:354 AA
molecular weight: 39137,26850 Da
isoelectric point:5,49181
aromaticity:0,11582
hydropathy:-0,60198

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AET72639.1 [NCBI]
Genbank nucleotide accession
JF974299 [NCBI]
CDS location
range 29247 -> 30311
strand +
CDS
ATGAGTACAGTTAGAGTAAATCAAATAGAAGCATCTTCAGAGCATGATTATGCTATTGAGATGGATGCGACTACAGATATCAATGTTGCTGGAACTTATGAAAATAATCCATCAAAGAAATTAGTAATACCTAGTGGTACTGAGGCACAACGTCCTGGAATACCTCAAATAGGTATGATGCGACATAATACTGAGAGTAATGCAGCAGAAGTTTATGATGGTACAGGTTGGATTGATTTTATCGGTGGTGCTGGAATTGGAACTAGTAATGTAACTGGTGACGGCACAAGTGTGGAAAATGCAGCATTTAGTGCAACTGCTCTAAAAGAAGAATATCCAAGTACTACAAGCGGTGCATATTATTATAAAATTCCTGGTACAAATAATGTAAAACGTTTATGGACGGATTTTAGTAATGATGGTGGAAACTGGGTCATCGTTAGTAAATGGGGTGGTCACAGTAAAAATACTACAAACGTTTATGATGCAGCAGAAAGAAATGTTTCTAATTTAGCAGTATCTACACTTGATGGATATGCAGATTTTTCACGACTTTCTAGAGATGATATGAATGCCATTTGGCAAGATAGTAGATTTGTTGTTAGAATTCATTTTAAAAATGATGATGCCACTGCTACTTCTGGAATTTATTTTCAGAAGAAATTAAATCGTCAAAGAGAGATGGATTTTTGGAGAGCACATTATCATCCTCTGCAATGGAGTAATGGCATCACGAATAGTTATCAAGCAACTGGTGGTGGTACTAATTATCAGGTGTCTTTTGCTGTAGCAAATACCAATCCAGAAATTTCTAATTATAGTGGAACAACTAACTTTCAACCTGCTACAGATAATGTTGCTGGTGGTAGTGGATATAATGCTAATATGGGATGGTGGGACCGTGGACATGTAACGGCACCAAATTTTGGTGTTATTGAAATCTCTAGACATATGGGATTTTTTGGTGATATCAACCAAGGTAACCAATGGATATTTACAGGTGCTACAGATAGTAGATTTAATAATAACGAGAATAGAAGATCTATCGTTCTTCTTCGTTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
61e730511eeeaf140e447d908e5304e5c203b9e56c3d6944a87c03d64ef6edd2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5281
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608SB47 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank