Protein

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Genbank accession
QIG74180.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MPGQSDNIILTTAGLNYLKARKQAGQKAVIQRFRIGDEYRFIPSEADTAIHGNQVYEGLAMEQMWWIQYSPDEIVVRCRVDSDKGDFLIGNLGLYTDTNELLFIRNFAYQHHKMHTTDKAPGGRWTFQLRIMTPNVLDLFDMSSIEQRYADMNERLLSNADTPSHPFDSFYTEIQLNDAFLPTNRSGYMTLSGRTSRSWYSPMFQMAESNVIVFDRYELSGGSAGDRHQGIW
Physico‐chemical
properties
protein length:232 AA
molecular weight: 26689,66690 Da
isoelectric point:5,49488
aromaticity:0,12069
hydropathy:-0,49009

Domains

Domains [InterPro]
DC_0381
STR
1–135
DC_0381
IPR022225
ATT
8–117
IPR022225
DC_2244
STR
110–232
DC_2244
QIG74180.1
1 232
Architecture
ATT
STR
ATT 1-117 | STR 118-232
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N42
[NCBI] 		2509752 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG74180.1 [NCBI]
Genbank nucleotide accession
MN988535.1 [NCBI]
CDS location
range 83228 -> 83926
strand -
CDS
ATGCCCGGACAATCAGACAACATTATTCTTACCACAGCGGGCTTGAACTATCTCAAGGCTCGCAAACAGGCTGGTCAGAAGGCGGTCATTCAGCGCTTTCGCATTGGTGACGAGTATCGCTTTATACCAAGCGAGGCCGATACGGCGATCCATGGCAATCAAGTCTATGAAGGGCTTGCCATGGAGCAGATGTGGTGGATTCAGTATTCGCCGGATGAAATCGTCGTGCGCTGCCGCGTCGATAGCGATAAGGGCGATTTCCTCATTGGCAATCTCGGTCTTTATACCGATACCAATGAGTTGCTGTTCATTCGCAATTTCGCCTACCAGCATCACAAGATGCATACCACGGATAAAGCGCCGGGTGGTAGGTGGACGTTCCAGCTTCGTATCATGACGCCGAACGTGCTTGATCTCTTCGATATGTCGAGCATCGAGCAGCGTTATGCCGATATGAATGAGCGACTGCTTTCCAACGCAGACACGCCATCGCATCCGTTCGATAGCTTCTACACCGAAATCCAACTCAACGACGCGTTTCTACCAACGAACCGTTCCGGCTACATGACGCTTTCAGGCCGCACGTCGCGTTCGTGGTATTCGCCAATGTTCCAGATGGCCGAGTCCAACGTCATCGTCTTTGATCGCTACGAGCTTTCAGGCGGATCGGCGGGCGACCGTCACCAAGGCATCTGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f4ddc4ef357327b7870595f69e04bff1d0337c51f3293063a208fd258fa3b5e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6680
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank