Protein

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Genbank accession
AUR82222.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MSGVLPRSGGGGAGFELGPAQNVFTGSDRTSAELERDTYTTANPSWLAEYEVATGVKPNIRLEFSDNGEPSVVHQVRNSTGTEWADNESVVAIKGDPGDSDISNVDDGQIPVREGSVLVSSGMQKLPSGQILAPKNFGVESASIDFGDVITVSEQSAFLGIHDNSSDRSYIVVDFERNRGEPSRSPRIFTSTEAETTDVVQADDSTELTGTSLTFDYTTTLTAYTNAITLKALTGMTNVRIKITPQGSSVGLKYIPQKSSWLSGQDGLTFVAGDNEIDLFDSSLALESGTVLTVEIQADSLSLLGTASGIPYLAVKKQDASFKSLVVKGAPVGVLGGETLAVQPNSSISASFSDPTTTETITINLDDGYDGGDFIEFVSANNLGTNTVVFNASSAIRFFDTNNNNFVDYTQLTLTGRSARFKFEWYGNDWRIVR
Physico‐chemical
properties
protein length:434 AA
molecular weight: 46331,37030 Da
isoelectric point:4,35486
aromaticity:0,08295
hydropathy:-0,22880

Domains

Domains [InterPro]
DC_1057
STR
8–434
DC_1057
AUR82222.1
1 434
Architecture
STR
STR 8-434
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR82222.1
1 434
Domain Start End Length (AA) Confidence
N-terminal 1 160 160 0,9845
Central domain 161 359 200 0,1286
C-terminal 360 434 74 0,9049
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-160
Central
161-359
C-terminal
360-434

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.022.O._10N.286.45.A10
[NCBI] 		1881418 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR82222.1 [NCBI]
Genbank nucleotide accession
MG592406 [NCBI]
CDS location
range 4561 -> 5865
strand +
CDS
ATGTCCGGAGTATTACCGAGAAGCGGCGGGGGCGGCGCGGGGTTTGAACTCGGCCCTGCTCAAAATGTTTTCACCGGTTCGGATAGAACATCCGCTGAACTAGAGCGCGACACTTACACGACCGCGAATCCGTCATGGCTTGCGGAGTATGAAGTCGCAACAGGCGTTAAGCCAAACATTCGTCTAGAGTTTTCGGATAACGGGGAACCCTCTGTCGTCCACCAAGTGCGAAACAGTACTGGCACTGAATGGGCTGACAATGAATCAGTGGTCGCTATTAAAGGCGATCCCGGTGATTCAGACATTAGTAACGTTGACGACGGTCAAATACCTGTCCGTGAAGGTTCCGTTCTGGTTTCGTCTGGTATGCAAAAACTACCTAGCGGTCAGATCTTAGCACCTAAGAACTTTGGGGTTGAATCCGCATCTATTGACTTCGGGGACGTCATTACCGTATCAGAGCAGAGCGCGTTCTTAGGTATTCATGACAACTCAAGCGATCGAAGCTATATCGTTGTAGACTTTGAGCGAAATCGGGGCGAGCCTTCTCGTAGTCCTCGCATATTCACATCAACAGAAGCTGAAACCACTGATGTGGTACAGGCCGACGATTCGACGGAGTTAACCGGCACTTCACTAACGTTCGATTACACTACGACGCTGACAGCCTATACAAACGCAATCACACTCAAAGCGTTAACGGGTATGACCAATGTTCGTATTAAGATCACACCACAGGGCAGTTCAGTAGGGTTAAAATATATCCCTCAGAAATCATCATGGTTGTCTGGGCAAGACGGACTAACGTTTGTCGCTGGTGATAATGAAATCGATCTATTCGACTCCTCTCTCGCTCTAGAGTCCGGTACGGTGTTGACCGTTGAAATACAGGCGGATTCGCTGTCATTACTCGGTACGGCTTCCGGTATTCCGTATCTAGCCGTTAAGAAGCAAGACGCCAGCTTTAAATCACTTGTGGTTAAAGGTGCTCCAGTCGGCGTATTGGGTGGCGAGACTCTAGCGGTTCAGCCAAATTCAAGCATTAGCGCGTCATTCAGCGATCCAACAACAACGGAAACCATCACGATAAATCTGGATGACGGGTATGACGGAGGTGATTTTATTGAATTTGTATCCGCTAACAACCTAGGAACAAATACTGTTGTGTTTAATGCGAGCTCTGCCATTAGGTTCTTCGACACCAATAACAACAACTTTGTGGATTACACGCAACTTACATTAACTGGCCGTTCAGCTCGATTTAAATTCGAATGGTATGGCAATGATTGGAGAATTGTACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
318ccf1cd4b1faf76c032d03bbe20ed72ec99c865ab7adedb9614ce7a037c9c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4924
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank