Protein

View in Explore
Genbank accession
QBX31696.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MEKVFYGGIELTKYITVAKGFTLFDGADFDPQFGDYSTSDGSGFLFTRKGVKKIPLPFYNKTGTFEEYDELQKALNTEEPKELKFSRAPEKVFYAIPTGTMSFEALVRNNGKGTITFVISDGLAHAKNSKYFEFKKNAQGVLEAEIINNGSAEIPVNYRIKLKHESGYVGIVSQYGAMQFGKIEETDLVEEKKNVLLAANGKGDFKNWTDGTIFYENQNKKVVMKMSADSSFGGRLGLLPANFTNTVNGAYFGAVKELKLSEQAKDWYIWARAWFETGLVSQTGAWCLSVVDSDNHLIAGMAIEKSERARNRALVAFLMGDGAGGSRVVKSIEFTPSVWVRDNPYSSEGRDQDRNMFDLRKQGDKVTYFWYGGYHSFFESRIKDKRAAKVQFFVGQYKGGNSSIPSLVTHHYLNDFSFYKLNVPFWRDVPNRYPTGAELFIDATGEMNPEEKGRLYVNNLLAPDDEILGTDYFKVPPGKTKVQLLVSSFAEVESARAEIEEAWI
Physico‐chemical
properties
protein length:504 AA
molecular weight: 56683,29880 Da
isoelectric point:6,19331
aromaticity:0,13492
hydropathy:-0,40179

Domains

Domains [InterPro]
G3DSA:2.40.30.200
ATT
1–125
G3DSA:2.40.30.200
DC_0420
STR
2–504
DC_0420
IPR008841
STR
10–118
IPR008841
IPR006520
Unmapped
66–125
IPR006520
QBX31696.1
1 504
Architecture
ATT
STR
ATT 1-125 | STR 126-504
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX31696.1
1 504
Domain Start End Length (AA) Confidence
N-terminal 1 261 261 0,6781
Central domain 262 460 200 0,2010
C-terminal 461 504 43 0,0471
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-261
Central
262-460
C-terminal
461-504

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan68
[NCBI] 		2548301 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus anginosus DORA_7
[NCBI] 		1403946 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus anginosus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX31696.1 [NCBI]
Genbank nucleotide accession
MK449004.1 [NCBI]
CDS location
range 29107 -> 30621
strand +
CDS
TTGGAGAAAGTATTTTATGGTGGAATTGAATTAACAAAATATATTACCGTCGCAAAAGGCTTCACACTTTTTGATGGTGCAGATTTTGATCCGCAATTTGGCGACTATTCAACCTCGGACGGTTCAGGATTTTTATTTACCAGAAAAGGGGTCAAAAAAATCCCTCTCCCATTTTATAACAAGACAGGAACCTTTGAGGAATACGACGAATTGCAGAAAGCGCTCAATACCGAAGAGCCCAAAGAGTTGAAGTTTAGTAGAGCACCCGAAAAAGTGTTTTATGCTATTCCAACCGGTACAATGAGTTTTGAAGCGCTTGTGCGTAATAATGGCAAAGGTACTATTACTTTTGTTATTTCAGACGGTCTAGCACACGCTAAGAATTCGAAGTATTTTGAGTTTAAGAAGAATGCGCAAGGTGTGTTAGAAGCTGAAATTATAAATAATGGTAGCGCAGAAATCCCGGTCAATTACCGAATCAAGCTCAAACATGAATCGGGCTATGTTGGCATTGTCAGCCAATACGGCGCTATGCAGTTTGGGAAAATTGAAGAAACAGATTTGGTTGAAGAAAAGAAAAACGTCCTCTTGGCCGCAAACGGCAAAGGGGATTTTAAGAATTGGACAGACGGCACTATTTTCTACGAAAATCAAAATAAGAAGGTGGTCATGAAAATGTCTGCTGATTCTAGTTTTGGTGGGCGTTTGGGATTGCTGCCGGCGAACTTTACAAATACAGTTAATGGGGCGTATTTTGGAGCGGTTAAGGAATTGAAGTTGTCTGAACAAGCGAAAGACTGGTATATCTGGGCTCGTGCTTGGTTTGAAACAGGCTTAGTCAGTCAGACAGGTGCTTGGTGCTTGTCAGTGGTGGATAGTGATAATCACTTAATTGCCGGCATGGCAATCGAGAAAAGCGAACGGGCACGCAACAGGGCGCTCGTTGCCTTTCTTATGGGTGATGGTGCTGGCGGTAGTCGAGTTGTCAAATCTATCGAATTCACACCGAGCGTTTGGGTAAGAGATAATCCATATAGTTCGGAAGGTCGAGACCAGGATCGGAACATGTTTGACTTGCGCAAACAAGGGGATAAAGTCACCTATTTCTGGTATGGTGGCTATCATTCTTTCTTTGAATCAAGAATTAAGGATAAGCGGGCTGCTAAAGTGCAGTTCTTTGTTGGGCAATATAAAGGGGGTAACTCCAGCATTCCTTCACTGGTCACTCATCATTACCTGAATGACTTTTCCTTTTACAAATTAAACGTGCCATTTTGGCGCGATGTACCCAATCGCTACCCGACAGGGGCAGAGCTCTTTATTGACGCCACAGGAGAAATGAACCCAGAAGAAAAAGGTCGCTTGTATGTCAATAACTTGTTAGCGCCTGATGACGAAATATTGGGAACAGACTACTTTAAAGTGCCGCCCGGCAAAACAAAAGTACAGTTGCTTGTGTCGAGCTTTGCGGAAGTAGAGAGCGCACGAGCAGAGATTGAGGAGGCTTGGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
40408f80eced1ac518d4756f63dbd76619960c885e68419fb01b4738cf8345be
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8261
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank