Protein

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Genbank accession
YP_009799262.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MALISQSIKNLKGGISQQPDILRYPDQGSRQVNGWSSETEGLQKRPPLVFLKTLGDNGALGQAPYIHLINRDENEQYYAVFTGTGIRVFDLAGNEKQVRYPNGSNYIKTANPRSDLRMVTVADYTFIVNRNVVVQKDPNSVNLANYNPKQDGLINIRGGQYGRELIVHINGKDVATYKIPDGSNPEHVNNTDAQWLAERLAKQMRINLSGWTVNVGQGFIHVTAPSGQQIDSFTTKDGYADQLINPVTHYAQSFSKLPPNAPNGYMVKIVGDASKSADQYYVRYDDERKVWTETLGWNTENQVLLETMPHALVRAADGNFDFKWLEWSPKSCGDVDTNPWPSFVGSSINDVFFFRNRLGFLSGENIILSRTAKYFNFYPASIANLSNDDPIDVAVSTNRIAILKYAVPFSEELLIWSDEAQFVLTASGTLTSRSVELNLTTQFDVQDRARPYGIGRNVYFASPRSSYTSIHRYYAVQDVSSVKNSEDITSHVPNYIPNGVFSICGSGTENFCSVLSHGDPSKIFMYKFLYLNEELRQQSWSHWDFGENVQVLACQSISSDMYVILRNEFNTFLARISFTKNAIDLQGEPYRAFMDMKIRYTIPSGTYNDDTFTTSIHIPTIYGANFGRGKITVLEPDGKITVFEQPTSGWQSDPWLRLSGNLEGREVFIGFNINFVYEFSKFLIKQTADDGSTSTEDIGRLQLRRAWVNYEDSGTFDIYVENQSSNWKYTMAGARLGSNTLRAGRLNLETGQYRFPVVGNAKFNTVYILSDETTPLNIIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 89439,93730 Da
isoelectric point:5,79328
aromaticity:0,11965
hydropathy:-0,39786

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
YP_009799262.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009799262.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 142 142 0,9916
Central domain 143 348 207 0,1612
C-terminal 349 794 445 0,1720
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-142
Central
143-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage YpP-Y
[NCBI] 		1176766 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Teseptimavirus
Host Yersinia pestis
[NCBI] 		632 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009799262.1 [NCBI]
Genbank nucleotide accession
NC_047939 [NCBI]
CDS location
range 19168 -> 21552
strand +
CDS
ATGGCACTCATTAGCCAATCAATCAAGAACTTGAAGGGTGGTATCAGCCAACAGCCTGACATCCTTCGTTATCCAGACCAAGGGTCACGCCAAGTTAACGGTTGGTCTTCGGAGACCGAGGGCCTCCAAAAGCGTCCACCTCTGGTTTTCTTAAAGACACTTGGAGACAACGGTGCGTTAGGTCAAGCGCCTTACATTCACCTGATTAACCGTGATGAAAACGAACAGTATTACGCTGTGTTCACTGGTACAGGAATACGTGTGTTTGACCTTGCTGGTAACGAGAAGCAAGTTAGGTATCCTAACGGTTCCAACTACATCAAGACCGCTAATCCACGTAGCGACCTGCGAATGGTTACTGTAGCAGACTATACGTTCATCGTTAACCGTAACGTTGTTGTACAGAAGGACCCAAATTCTGTCAACTTGGCGAATTACAACCCTAAGCAAGACGGATTGATTAACATTCGTGGTGGTCAGTATGGCAGGGAACTAATTGTACACATTAACGGTAAAGACGTTGCTACGTATAAGATCCCAGATGGTAGTAACCCTGAACACGTAAACAATACGGATGCCCAATGGTTAGCCGAAAGGTTAGCCAAGCAGATGCGCATTAACTTGTCTGGTTGGACTGTAAATGTAGGGCAAGGGTTCATCCATGTGACCGCACCTAGTGGTCAACAGATTGACTCCTTCACGACTAAAGATGGCTATGCAGACCAGTTGATTAACCCTGTGACCCACTATGCTCAGTCGTTCTCTAAGTTGCCACCTAATGCTCCTAACGGCTACATGGTGAAAATCGTAGGGGACGCCTCTAAGTCTGCCGACCAGTATTACGTTCGGTATGATGATGAGCGTAAAGTTTGGACTGAGACTTTAGGTTGGAACACTGAGAACCAAGTTCTATTGGAAACCATGCCACACGCTCTTGTGCGAGCCGCTGACGGTAATTTCGACTTCAAGTGGCTTGAGTGGTCTCCTAAGTCTTGTGGTGACGTTGACACTAACCCTTGGCCTTCTTTTGTTGGTTCAAGTATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGATTCCTTAGTGGGGAGAACATCATATTGAGTCGTACAGCCAAATACTTCAACTTCTACCCTGCGTCCATTGCTAACCTTAGTAATGACGACCCTATAGACGTAGCTGTGAGTACCAACCGAATAGCAATCCTTAAGTACGCAGTTCCGTTCTCAGAAGAGTTACTCATCTGGTCCGATGAAGCACAATTCGTCCTGACTGCTTCTGGAACTCTCACGTCTAGGTCGGTTGAGTTGAACCTAACGACTCAGTTTGACGTACAGGACCGAGCGAGACCTTATGGGATTGGCCGTAATGTCTACTTTGCTAGTCCGAGGTCCAGCTACACGTCCATCCACAGGTACTACGCCGTGCAGGATGTAAGTTCCGTTAAGAACTCTGAGGATATCACATCACACGTTCCTAACTACATCCCTAATGGTGTGTTTAGTATTTGTGGTAGTGGTACGGAAAACTTCTGTTCGGTACTATCTCACGGGGACCCAAGTAAAATCTTCATGTACAAATTCCTGTACCTGAACGAAGAGTTAAGGCAACAGTCGTGGTCACATTGGGACTTTGGGGAAAACGTACAGGTTCTAGCGTGTCAGAGTATCAGCTCAGATATGTACGTTATTCTTCGCAATGAGTTCAATACGTTCCTAGCTAGAATCTCTTTCACTAAGAACGCCATTGACTTACAAGGTGAACCCTATCGTGCCTTTATGGACATGAAGATTCGCTACACGATTCCTAGTGGAACATACAACGATGACACATTCACTACCTCTATCCATATTCCAACCATTTATGGTGCAAACTTCGGGAGAGGCAAAATCACCGTATTGGAGCCTGATGGTAAGATAACCGTATTTGAGCAACCTACATCTGGGTGGCAAAGCGACCCTTGGCTGAGACTCAGCGGTAACTTAGAGGGACGTGAAGTGTTCATTGGGTTCAACATCAACTTCGTCTATGAGTTCTCTAAGTTCCTCATCAAGCAAACTGCCGACGACGGGTCTACCTCCACGGAAGACATTGGTCGTTTACAGTTACGCAGAGCGTGGGTTAACTATGAGGATTCTGGTACGTTCGACATTTATGTTGAGAACCAATCGTCAAACTGGAAGTACACAATGGCTGGTGCTCGATTAGGCTCTAATACTCTGAGGGCTGGGCGATTGAACTTAGAGACCGGACAATACAGATTCCCTGTGGTTGGTAACGCCAAGTTCAATACCGTGTACATCTTGTCAGATGAGACTACACCTCTGAACATCATTGGGTGTGGCTGGGAAGGAAACTACTTACGGAGAAGTTCCGGTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d9eb40e5fc85212860c6397040800877236b5f547a4b18104c823fef4daf8e7c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Yersinia pestis-specific, lytic phage preparation significantly reduces viable Y. pestis on various hard surfaces experimentally contaminated with the bacterium Rashid,M.H., Revazishvili,T., Dean,T., Butani,A., Verratti,K., Bishop-Lilly,K.A., Sozhamannan,S., Sulakvelidze,A. and Rajanna,C. 2012 23275868 GenBank