Protein

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Genbank accession
AGZ17512.1 [GenBank]
Protein name
Ig domain-containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,81
Protein sequence
MFPIPSLFLLMAGGGTTPLPPGGVKKIAFTREQTTGVKRSMAILLSDGRLYTQGDNAWGECADGTTSPFYDHWKLAASNVADVFGVGKAFVVKYNSGGWQYAGDQGQFTGTTANMMAWTSFPSSITGTVNLANLVSVVGGGGNALWVMNNGTLYGSGSNANGCLGSGNSNPISIPRTISSSCVRAFGLNACVTYLNNVGVPRVCGSTYGINGSFTPITSFASVTFPGATGTIYAKEWMCNEDNTIAIASTGASDTDHYLYTRGITTSNGAYTKVTTFGPFTTFRVLDGGQSRFFIADGVLYALGDSQRNLGLGNTTTAVTVPTIIPVPTGADWDLSKLTFVAEIKGDNMAQGGTLGHWMVYDGNLFYTGNPKGFFGSTTVVGNFTNVPENSFEGIRADSITTGAIGVAIVGATKQLTWSIDPPGAEIYDLQFSSSHPEFATVDANGLMTFVAEGGFDITMTAKTGTSATTLTDTSGGYASTMGMATDSLSAMTVGETKQLVYTVTPAGVENLDGYSITFSSEDPTVATVSSTGLITAVADGGTRIHATAALQTVTADDSSYLSVNAP
Physico‐chemical
properties
protein length:567 AA
molecular weight: 58833,99690 Da
isoelectric point:4,67776
aromaticity:0,09877
hydropathy:0,06102

Domains

Domains [InterPro]
DC_0065
STR
1–530
DC_0065
IPR009091
STR
16–193
IPR009091 IPR003343 IPR003343
IPR009091
STR
40–404
IPR009091 IPR003343 G3DSA:2.60.40.1080
G3DSA:2.60.40.1080
STR
397–474
G3DSA:2.60.40.1080 IPR008964
IPR008964
RBD
410–469
IPR008964 IPR003343
AGZ17512.1
1 567
Architecture
STR
STR 1-564 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGZ17512.1
1 567
Domain Start End Length (AA) Confidence
N-terminal 1 25 25 0,0007
Central domain 26 415 391 0,8037
C-terminal 416 567 151 0,1212
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-25
Central
26-415
C-terminal
416-567

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage 4MG
[NCBI] 		1391428 Uroviricota > Caudoviricetes > Vequintavirinae > Seunavirus 4MG >
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGZ17512.1 [NCBI]
Genbank nucleotide accession
KF550303 [NCBI]
CDS location
range 21651 -> 23354
strand -
CDS
ATGTTTCCTATCCCAAGTCTCTTCCTGCTAATGGCGGGTGGTGGGACAACACCTCTGCCACCAGGCGGGGTAAAAAAGATTGCCTTCACAAGAGAGCAGACCACAGGTGTTAAAAGATCTATGGCTATCCTGCTGTCTGACGGAAGACTATACACCCAAGGTGATAACGCTTGGGGTGAATGTGCAGATGGAACAACCAGCCCATTTTACGATCACTGGAAGCTTGCTGCAAGTAATGTAGCAGATGTTTTTGGTGTTGGGAAGGCTTTTGTTGTAAAATATAATAGCGGTGGCTGGCAATATGCGGGTGACCAAGGTCAGTTCACAGGTACAACGGCTAACATGATGGCATGGACCAGTTTTCCATCTTCAATTACTGGCACTGTTAACCTGGCAAACCTTGTCAGTGTGGTTGGTGGTGGTGGTAACGCATTGTGGGTCATGAACAACGGAACTCTTTATGGCAGCGGATCTAATGCAAACGGATGTCTGGGATCAGGAAACTCAAACCCGATCTCTATCCCGCGAACAATTAGTTCTTCCTGTGTCCGTGCGTTTGGCCTGAATGCTTGTGTGACCTATCTTAACAACGTTGGTGTTCCTCGTGTATGTGGTTCTACTTACGGTATTAACGGGTCATTTACACCAATCACCAGCTTCGCCAGCGTAACATTCCCAGGGGCTACCGGGACCATCTACGCAAAAGAGTGGATGTGCAACGAAGACAACACGATTGCAATCGCCTCTACTGGTGCTTCAGATACCGACCATTATCTTTACACCCGTGGCATTACAACAAGTAACGGGGCCTATACAAAAGTTACTACGTTCGGTCCTTTTACGACTTTCCGTGTTCTTGATGGTGGACAATCAAGATTCTTCATCGCTGATGGTGTTCTATATGCCCTCGGTGATTCACAGAGAAACCTTGGACTGGGTAACACCACCACTGCTGTAACTGTGCCAACCATCATCCCTGTACCTACGGGGGCCGATTGGGACCTGAGTAAGCTGACCTTTGTTGCTGAGATAAAAGGAGACAACATGGCTCAGGGTGGTACACTGGGGCATTGGATGGTCTACGATGGTAACCTGTTCTACACTGGTAACCCTAAAGGATTTTTCGGATCAACGACTGTGGTTGGTAACTTCACAAACGTTCCTGAGAATTCCTTCGAAGGTATCCGTGCAGATTCCATCACGACAGGCGCTATCGGTGTTGCGATTGTTGGTGCTACGAAACAGCTTACGTGGTCTATCGACCCACCTGGGGCTGAAATCTATGACCTACAGTTTAGCTCAAGTCACCCAGAGTTTGCAACTGTTGATGCTAACGGATTAATGACGTTCGTTGCGGAAGGTGGATTTGATATCACCATGACGGCGAAGACAGGGACTAGTGCAACAACTCTGACAGATACCTCTGGTGGTTATGCCTCTACGATGGGAATGGCTACAGATAGTCTCTCTGCAATGACTGTTGGTGAGACCAAGCAATTGGTATACACTGTCACACCAGCGGGTGTAGAGAACCTTGACGGCTACTCAATCACCTTCTCAAGTGAAGACCCGACTGTCGCCACAGTAAGCTCCACAGGACTTATTACGGCAGTGGCTGACGGTGGAACACGTATCCATGCTACAGCAGCCCTACAGACTGTGACAGCAGATGATAGTTCTTATCTGTCGGTAAACGCTCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d12c401e9ffdd8f3632f0e1d80914624c52ebe060aa7735666b1d5d014546e14
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8358
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of enterobacteria phage 4MG, a new member of the subgroup 'PVP-SE1-like phage' of the 'rV5-like viruses' Kim,M., Heu,S. and Ryu,S. 2014 24938485 GenBank