Protein

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UniProt accession
A0A8S5RBB3 [UniProt]
Protein name
Minor structural protein
RBP type
TSP
Evidence RBPdetect
Probability 0,67
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MKNINWGADFNLLYARYYSKYLVDGKEYNQTLNEFKYSNIINPNNSISIGNTCSSSVTFSIYNPEITLENKDITIFEGVKGDSGIEYVQTGIFTVTKEESNGEYTKYTAYDKMYKAEKGYFSKLTYPSTDKAILEEICIKLGIKLATSITNTHTIIDKPQGYTMREMIGYMAMLQGGNAAINSDGNLEIKWYKDSGYVLDGHQYYQQGVTFTTSKDFTIRKLTCNNTKSGDKETSTITSGSGTTGLSFANPFMTQANLNEIYKKIGGFQFRPLTVKFLGDWRLEVGDIITVNKGGIDYEVPIMQITHECDGGLMDTVTSIGQSDTENSNIASGPITKQMERYYADLVLINKAVIENADITSANIESLKAHQAYIDQLKANKIEAITADIVNLTASKATINEANIAKLQADYAQVGVLNADVADIKTLMFGSATGKSLTTEFANAVVSVIGNAQIKDAMIDSIAASKITALDLNTTKFKVHSENGMSYWQDNTIIIKDTDRIRVQIGKDANSDYNMYVWDKAGNLMFDALGLTEKGVTRKVVRDDVVQDNANINASKLDIETLFSVINNDNTHTLKSNKIYLDNEGQTLNVIMQAITSGAGKDYTQWGGMMKVASDFITNKLWWTSNVDTESIQTKFSTVNQKLDSYEITLSDLYQQTNDNFMVYTVTATPTKDNYPAVDWFISIYPSDDLFPSDNLTWTYSNDEYAKHRGAIAYNETAQKTWRWAKDDKGNWGWKEVSNTQLAYMLNQNASLKINLNSISTELTQTKKNLTDNYSTTTTMINKITQEINDNGSSISLALSGTYAKSSDLESYATKTSLDLYIKKDPKTGELKSAIEAIADTINITARGGLNLSGNRFTLNSTNASITADGTITCSNLIANGGNVGGWKVSKDSISTIFKQNNDLFRIALQIPGDITPYVFSVFHGTEDEGYSKSPNFYISQTGKLYATNAQITGSGYFSSGTIGGWDISKSSIYKDYGKYRTYIQAPANSEAWTFSCQEERDGAYYGNWYVRADGYMYASKGQIGNFSIDNGILSTYQNNGIKGMSIDQNYIKFYSWVDDYENYVGSITTTRYYTSNNEVRRALVLNADYGDVVGINCTKNKTENTEYEFIIRINDDLNKSLEFFSPNISMNGGYQDNIKKPTTLTVYCYNPNSGKDTQNVRITNTEDRHYENCELSVYGSTYIGYDLRCFGSIYGTIASDSDENVKKDVHLLNSEDSSEFIYNLKPCEFKMINGTSNRYHHGFIAQQVKETMKDDWGLFIDKKINNDNYETQVSDENGNTTKELTARYALRYDELIADLVATVQSQNMRIKKLEKQLSN
Physico‐chemical
properties
protein length:1320 AA
molecular weight: 147665,80840 Da
isoelectric point:5,07444
aromaticity:0,10682
hydropathy:-0,48303

Domains

Domains [InterPro]
DC_1421
STR
4–806
DC_1421 DC_0203
IPR030392
CHP
1202–1318
IPR030392
IPR036388
RBD
1202–1318
IPR036388
IPR030392
CHP
1202–1255
IPR030392 Coil
A0A8S5RBB3
1 1320
Architecture
STR
RBD
STR 4-806 | RBD 1173-1320
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5RBB3
1 1320
Domain Start End Length (AA) Confidence
N-terminal 1 665 665 0,8890
Central domain 666 1125 461 0,6114
C-terminal 1126 1320 194 0,9317
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-665
Central
666-1125
C-terminal
1126-1320

Taxonomy

  Name Taxonomy ID Lineage
Phage virus sp. ctRTq15
[NCBI] 		2828253 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE28260.1 [NCBI]
Genbank nucleotide accession
BK059084 [NCBI]
CDS location
range 28265 -> 32227
strand +
CDS
ATGAAAAATATTAATTGGGGTGCGGATTTCAATTTGCTGTATGCAAGATATTACAGCAAATATTTAGTTGACGGAAAAGAATACAATCAGACACTTAATGAGTTTAAGTACAGCAACATAATCAATCCGAACAATAGCATTTCGATAGGTAATACTTGCAGTAGTAGTGTTACCTTTTCTATTTATAATCCAGAAATCACGCTTGAAAATAAGGATATAACCATTTTTGAGGGTGTTAAGGGCGATAGCGGCATTGAGTATGTACAGACAGGCATATTTACTGTAACTAAAGAAGAAAGTAACGGCGAATACACTAAGTACACAGCTTATGACAAGATGTACAAAGCTGAAAAAGGGTACTTCTCTAAATTAACTTATCCTAGTACAGACAAGGCTATTTTAGAGGAGATTTGCATAAAATTAGGCATAAAGTTAGCAACTAGCATAACAAACACACATACAATCATAGATAAGCCGCAAGGCTATACAATGCGTGAAATGATAGGTTATATGGCTATGCTACAAGGTGGAAATGCGGCTATTAATTCTGACGGAAACCTTGAAATAAAGTGGTACAAAGATAGCGGTTATGTGCTTGACGGACATCAATACTATCAGCAAGGGGTTACTTTTACCACTAGCAAAGATTTTACGATAAGAAAGCTGACTTGTAACAATACAAAGTCTGGTGATAAGGAAACTAGCACAATCACTAGCGGCAGTGGTACAACTGGACTTAGCTTTGCTAATCCATTTATGACACAAGCTAACTTAAATGAGATTTATAAGAAGATAGGCGGCTTTCAGTTTAGACCGCTTACAGTTAAGTTTTTAGGTGATTGGCGATTAGAGGTAGGCGACATTATAACTGTTAATAAGGGCGGCATTGATTACGAAGTACCTATAATGCAGATTACGCACGAATGTGACGGCGGACTTATGGATACTGTTACATCTATCGGACAATCTGACACAGAAAACAGCAATATTGCTAGTGGTCCGATAACAAAGCAAATGGAACGATACTACGCTGATTTAGTCTTAATCAACAAGGCAGTTATCGAAAATGCCGATATAACTAGTGCTAATATTGAGAGTTTAAAAGCACATCAAGCGTATATCGACCAATTAAAGGCTAATAAGATTGAAGCTATTACAGCAGATATTGTTAATTTGACAGCAAGTAAAGCTACAATTAATGAAGCTAATATCGCTAAGTTACAAGCAGATTATGCACAGGTAGGCGTGTTAAATGCAGATGTAGCAGACATTAAGACCTTAATGTTTGGTTCTGCGACAGGTAAAAGTTTAACAACAGAATTCGCTAATGCAGTTGTAAGTGTTATCGGCAATGCACAGATTAAAGACGCTATGATTGACAGCATAGCTGCAAGCAAGATTACAGCACTTGACCTTAACACTACTAAATTTAAGGTTCATAGTGAAAATGGAATGTCTTATTGGCAAGACAATACAATTATCATCAAAGATACTGACAGAATAAGAGTTCAAATAGGTAAAGACGCTAATTCGGACTACAATATGTATGTCTGGGATAAAGCTGGCAATCTTATGTTTGATGCCTTAGGACTTACTGAAAAAGGTGTTACGAGGAAAGTTGTTCGTGATGATGTTGTTCAAGATAATGCTAATATCAATGCAAGCAAGCTGGATATTGAAACACTATTTAGTGTTATCAATAACGATAACACCCATACACTTAAGAGCAATAAAATTTATCTGGACAACGAGGGACAGACACTTAATGTCATTATGCAAGCTATAACAAGTGGTGCTGGCAAAGATTATACTCAATGGGGCGGTATGATGAAAGTTGCTAGTGATTTTATCACTAACAAGTTGTGGTGGACTAGCAATGTTGATACTGAAAGCATTCAGACTAAGTTTTCTACTGTTAATCAGAAGCTAGATAGCTACGAAATAACATTATCTGACTTATACCAACAAACGAACGATAATTTTATGGTGTATACAGTAACAGCAACGCCTACAAAAGATAATTATCCAGCCGTTGACTGGTTCATATCCATATATCCGTCAGACGATTTATTTCCAAGTGATAATCTTACTTGGACTTACAGCAATGATGAATATGCTAAACATCGCGGAGCGATAGCATACAACGAAACAGCTCAAAAAACTTGGCGTTGGGCTAAAGATGATAAAGGTAATTGGGGTTGGAAAGAGGTATCTAACACACAATTAGCTTATATGCTTAATCAAAACGCTAGTCTTAAGATTAATCTTAATAGCATATCAACAGAATTAACACAGACAAAGAAAAATCTGACAGATAATTATAGTACAACAACTACTATGATTAACAAAATTACGCAGGAAATTAATGATAATGGTTCAAGTATTAGTTTGGCGCTTAGTGGAACTTACGCTAAGTCAAGCGATTTAGAAAGTTATGCAACTAAAACAAGCCTTGATTTATATATCAAAAAAGACCCTAAAACAGGCGAGCTTAAGAGTGCTATCGAAGCTATTGCAGATACAATAAATATTACTGCAAGGGGTGGGCTTAATTTAAGTGGCAACAGGTTTACATTAAACAGCACGAACGCCAGCATTACAGCAGACGGAACTATAACTTGTAGCAATCTGATTGCCAACGGCGGAAACGTTGGCGGCTGGAAAGTGTCTAAAGATTCAATAAGTACAATATTTAAGCAGAATAATGACTTATTCAGAATTGCATTACAAATACCTGGTGATATTACACCATATGTTTTTTCGGTTTTTCACGGAACTGAAGATGAGGGATACAGCAAAAGTCCTAATTTTTATATAAGTCAAACTGGTAAACTATATGCAACTAACGCACAAATTACAGGAAGCGGCTATTTTTCGTCTGGCACGATTGGAGGCTGGGACATCAGCAAGTCTTCTATCTATAAAGATTACGGCAAATATAGAACTTATATACAGGCACCCGCTAATTCCGAAGCTTGGACATTCTCTTGCCAAGAAGAAAGAGATGGGGCATATTATGGTAATTGGTACGTTCGTGCGGATGGATATATGTATGCTTCTAAAGGTCAAATTGGCAATTTCTCAATTGATAATGGTATATTGTCGACATATCAAAATAATGGAATTAAAGGAATGTCGATAGACCAAAATTACATTAAATTCTATTCTTGGGTCGACGATTACGAAAATTATGTAGGTTCGATAACTACAACAAGATACTATACTAGCAATAATGAAGTAAGAAGAGCTTTAGTGCTCAATGCAGATTATGGAGATGTTGTCGGAATAAATTGCACTAAGAATAAAACAGAAAATACGGAATACGAATTCATTATAAGAATAAACGACGATTTAAACAAATCATTAGAGTTTTTTTCGCCCAATATTTCGATGAATGGCGGTTACCAAGACAATATTAAAAAACCAACGACACTTACAGTATATTGCTATAATCCAAATTCGGGAAAAGACACACAAAATGTCAGAATTACAAATACAGAGGACAGACACTACGAGAACTGTGAACTGTCAGTATATGGAAGTACATACATAGGATATGATTTGCGATGTTTCGGGTCAATTTATGGAACAATCGCTTCTGATTCAGACGAGAACGTAAAAAAAGATGTTCATTTATTGAATTCAGAAGACTCTTCTGAATTTATCTACAATTTAAAACCTTGCGAATTTAAAATGATTAACGGTACTTCTAATCGCTACCATCACGGATTTATTGCACAGCAGGTTAAAGAAACTATGAAAGATGACTGGGGATTATTTATCGATAAAAAGATTAATAATGATAACTACGAAACACAAGTCTCAGACGAAAACGGAAATACAACTAAAGAACTAACAGCAAGATACGCATTACGCTATGATGAATTAATAGCGGATTTAGTTGCGACTGTACAATCGCAGAATATGCGTATTAAAAAATTAGAAAAGCAACTAAGTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3a238c2760c224c6ba388f257b2bfd01e539ef4eae3c369e9a736f171e140b47
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7169
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50