Protein

View in Explore
Genbank accession
QKN87148.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,57
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MNDSAVDFDKIFASAAPIERDLEEHEYLKGWAYLDEKAPEFEDFDSVMRLQDRKAQILKRAVDELRQLEEETRQEVEKLQDQMGGADGFLMANNNLSDVPDKAEARKNLQLGDASVKNVGTTADTVAAGDDERFNDNGKLSGSNSWTGANLFNGPFTLCAKDGSPEGGELTFTDKDNERAFFIDVNSAGDLRVVRSGADPNVAATVPLVIKRQENRILVVSHVNVNGEIKAAGELKLGGDTVGVNGCAMSVDGNLHGPAWGGGNLKSYVDSVGGGKVGSVARGAQVTTAEFGYMQGNFRSPQVVPAGCYLNGLVVGRTSTANSGFAQVIALIYRPVMIHVNGQWLQIGDIA
Physico‐chemical
properties
protein length:351 AA
molecular weight: 37600,43600 Da
isoelectric point:4,74204
aromaticity:0,06838
hydropathy:-0,32877

Domains

Domains [InterPro]
DC_1977
STR
41–157
DC_1977 DC_0801
Coil
Unmapped
48–82
Coil
QKN87148.1
1 351
Architecture
STR
RBD
STR 41-157 | RBD 270-349 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage vB_YenM_534
[NCBI] 		2736218 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Yersinia enterocolitica
[NCBI] 		630 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKN87148.1 [NCBI]
Genbank nucleotide accession
MT366940.1 [NCBI]
CDS location
range 37342 -> 38397
strand +
CDS
ATGAATGATAGTGCGGTAGACTTTGACAAGATTTTTGCCAGCGCCGCGCCGATTGAGCGAGATCTTGAGGAGCACGAATATTTAAAGGGTTGGGCCTATCTTGACGAGAAAGCGCCGGAATTTGAAGATTTCGACAGCGTTATGCGGTTGCAGGATCGCAAGGCTCAAATCTTAAAGCGTGCCGTGGATGAGCTGCGACAACTGGAGGAGGAAACGCGCCAAGAGGTTGAGAAGTTGCAGGATCAAATGGGGGGCGCAGATGGCTTCCTGATGGCTAATAATAACCTGTCAGACGTTCCAGACAAAGCGGAAGCAAGAAAAAACTTGCAATTGGGTGACGCTTCGGTTAAAAATGTCGGCACCACAGCCGATACGGTAGCTGCTGGCGACGACGAGCGATTCAACGACAACGGCAAACTAAGCGGATCTAACTCTTGGACTGGAGCAAACCTGTTTAATGGCCCGTTCACCCTCTGCGCTAAAGATGGTAGTCCAGAGGGCGGGGAGCTAACATTTACAGACAAGGATAATGAAAGAGCATTCTTTATTGATGTTAACTCGGCTGGAGACTTGCGAGTTGTTAGGTCTGGAGCAGATCCAAACGTAGCCGCTACCGTTCCGTTGGTAATCAAAAGGCAAGAAAATAGAATTCTTGTGGTAAGTCATGTAAATGTTAACGGGGAAATTAAGGCCGCCGGAGAGCTAAAACTAGGCGGCGACACGGTTGGCGTAAATGGTTGCGCTATGAGCGTAGACGGCAACTTACATGGCCCCGCATGGGGCGGTGGAAACCTGAAATCCTACGTTGACTCAGTTGGCGGCGGCAAAGTTGGGTCTGTTGCGCGAGGGGCGCAGGTTACAACGGCTGAATTCGGGTATATGCAAGGTAACTTTAGAAGCCCGCAGGTTGTACCGGCTGGATGCTATCTTAATGGTCTAGTTGTCGGAAGAACTTCAACCGCAAACTCAGGTTTTGCTCAGGTTATCGCTTTGATTTATCGGCCTGTTATGATTCATGTTAACGGGCAATGGCTACAAATTGGAGATATTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b59a14c504e1f6dea5b1058d9f1ec5d5539b54e64c97d70bafae4b575d5c2cb5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7296
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequences of Yersinia phage genomes Hammerl,J.A. and Hertwig,S. 2018-05-10 — GenBank