Protein

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Genbank accession
WJZ48158.1 [GenBank]
Protein name
packaged DNA stabilization protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,76
Protein sequence
MKTPILGSSYVARSVNAANARMVNLFPEIVPEAGKEPAFLNRAPGLKLEFTAGFGPIRGLWVLGSNLYVVSGTQLYKVTPAYVVTLIGSVTGTGPVSMADNGTQLFVACNGPSYIYNSLTDVFQQITDPDFPGAVTVGYLDGYFVFNEPNSQKIWVTALLEGTLVDPLDFASAEGSPDGVVGIIVDHGQLWVYGTNSIEVWYNSGNPDFPFERIQGAFNELGCAAAYSLAKMDNGLFWLGKDARGQGMVYRANGYSGQRISTHAIEWHIQQYGDLSDAIGYTYQQDGHSFYVLIFPTADTTWVYDVATQAWHERAGFANGEFTRHRSNCQAFFGTKVLVGDYQNANIYSFDLDDFSDNGSIQKWLRSWRALPTGQNNLKRTAHHSLQLDCETGVGLNLGQGSDPEVMLRWSDDGGHTWSNEHWVSIGKIGEYYRRAIWRRLGMTLKLRDRVYEVSGTDPVKIAIMGAELMISPTNA
Physico‐chemical
properties
protein length:476 AA
molecular weight: 52526,30850 Da
isoelectric point:5,22444
aromaticity:0,12395
hydropathy:-0,17941

Domains

Domains [InterPro]
DC_0229
STR
1–476
DC_0229
SSF63825
STR
47–201
SSF63825
IPR021098
STR
66–447
IPR021098
WJZ48158.1
1 476
Architecture
STR
STR 1-476
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WJZ48158.1
1 476
Domain Start End Length (AA) Confidence
N-terminal 1 457 457 0,7716
Central domain 458 465 9 0,0006
C-terminal 466 476 10 0,9956
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-457
Central
458-465
C-terminal
466-476

Taxonomy

  Name Taxonomy ID Lineage
Phage Phage DSL-LC05
[NCBI] 		3058959 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Gammaproteobacteria
[NCBI] 		1236 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WJZ48158.1 [NCBI]
Genbank nucleotide accession
OR003940 [NCBI]
CDS location
range 17773 -> 19203
strand -
CDS
ATGAAGACGCCCATCCTCGGCTCATCCTACGTGGCCCGCAGTGTCAACGCTGCAAATGCCCGCATGGTCAACCTGTTCCCCGAGATCGTGCCCGAGGCTGGTAAAGAGCCTGCGTTCTTGAACCGCGCTCCCGGCCTAAAGCTGGAGTTCACGGCTGGCTTTGGCCCGATCCGTGGCCTGTGGGTGCTTGGCAGCAACCTGTACGTGGTCAGCGGCACTCAACTGTACAAGGTGACCCCTGCCTACGTGGTAACCCTAATCGGCAGCGTGACGGGCACTGGTCCTGTCAGCATGGCCGACAACGGCACCCAGTTGTTCGTGGCCTGCAACGGCCCCTCGTACATCTACAACTCGCTGACCGATGTGTTTCAACAGATCACCGACCCGGACTTTCCCGGCGCTGTGACCGTGGGCTACTTGGACGGCTACTTTGTATTCAACGAGCCAAATAGTCAGAAAATCTGGGTCACTGCGCTGCTTGAGGGCACTCTTGTTGACCCACTCGATTTTGCGTCTGCTGAAGGTTCTCCTGACGGTGTGGTCGGCATCATCGTGGACCACGGGCAACTGTGGGTCTACGGCACCAACTCCATTGAGGTCTGGTACAACAGCGGCAACCCAGACTTTCCGTTTGAGCGCATCCAAGGTGCATTTAACGAGTTGGGTTGTGCCGCCGCATACTCGCTTGCCAAGATGGACAACGGCCTGTTTTGGCTGGGTAAAGACGCCCGTGGTCAGGGCATGGTCTACCGGGCCAACGGATACTCCGGCCAGCGCATCTCGACCCATGCTATCGAGTGGCACATTCAACAGTATGGCGACCTGTCGGACGCCATTGGGTACACCTACCAGCAAGACGGCCACAGCTTCTACGTGCTGATCTTCCCCACCGCAGACACCACATGGGTCTACGATGTGGCGACGCAGGCATGGCACGAGCGGGCAGGGTTTGCCAATGGCGAGTTCACCCGTCACCGCAGCAACTGCCAAGCGTTTTTCGGCACCAAGGTGCTGGTGGGCGACTACCAGAATGCCAACATCTACTCGTTCGATCTGGACGACTTCTCGGACAACGGCAGCATTCAGAAGTGGTTGCGCTCGTGGAGAGCACTGCCCACCGGCCAGAACAACTTGAAGCGCACCGCGCACCACAGCCTCCAGCTTGACTGCGAGACAGGTGTCGGTTTGAACCTTGGGCAAGGCAGCGACCCCGAGGTCATGCTGCGCTGGTCAGACGATGGTGGGCACACATGGTCCAACGAGCACTGGGTCAGCATCGGCAAGATCGGCGAATACTACCGCCGTGCCATCTGGCGCAGGCTGGGTATGACGCTCAAGCTGCGTGATCGTGTCTACGAGGTGTCGGGCACCGACCCTGTGAAGATTGCCATCATGGGTGCTGAACTAATGATTAGTCCGACCAATGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf89a9642194f467eac6f2692f9c41bdbad414fb6e551cee9171ecd777c208b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8970
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50