Protein

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Genbank accession
YP_007236680.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MIIKMGEVETHINPRNVDIGDIGSRFYTEDENTAFIRIRINYNGSPVDLTKTDMKPKLDLFMEDGSVFIDETIEVLIPEIGLIKYDIPSNVIKHIGKVNCKLFMDSLEHSVHVANFSFTIVDSGVEEAVAKEVNLNIVKDTVKQIMSEDLVDLLNDGFKDKLTGDLENYLSTHNEEFKGPKGDKGPQGEQGPQGLQGEQGIQGEKGEQGPQGATGPQGPPGKDGRDGVDGKSFAYDDFTPEQLDKLKPELPDFSKWQKYKLTNDDGNQIATFDSDNRMTNENLLSTPTGFYYNYEYDDSPNGSEGVVYVMEYTDECKKVYYSSYRYNDLYVKTYHPDFGWLEWEEISNGYTDTGWIPLAIKNDYEIITNLNYEQSYRVIDYGNFKKVSVRLGVIDNSPSNHSVVASIPEYLNPYDVFGYGVSTTQGGRPVTVTIVDGDIMLYSNSFASSMNTYYQGEWII
Physico‐chemical
properties
protein length:460 AA
molecular weight: 51824,86550 Da
isoelectric point:4,46484
aromaticity:0,11304
hydropathy:-0,57522

Domains

Domains [InterPro]
DC_0885
STR
1–401
DC_0885
IPR018913
ATT
8–145
IPR018913 PTHR24637
G3DSA:2.60.40.3350
ATT
10–126
G3DSA:2.60.40.3350 IPR008160
G3DSA:1.20.5.320
STR
200–247
G3DSA:1.20.5.320
YP_007236680.1
1 460
Architecture
ATT
STR
ATT 1-145 | STR 146-401 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007236680.1
1 460
Domain Start End Length (AA) Confidence
N-terminal 1 336 336 0,9502
Central domain 337 449 114 0,0326
C-terminal 450 460 10 0,9961
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-336
Central
337-449
C-terminal
450-460

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage StB20
[NCBI] 		1147043 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus capitis
[NCBI] 		29388 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007236680.1 [NCBI]
Genbank nucleotide accession
NC_019915.1 [NCBI]
CDS location
range 35877 -> 37259
strand +
CDS
ATGATTATTAAAATGGGAGAAGTCGAAACACATATCAACCCTAGAAATGTTGATATAGGGGATATTGGTAGTCGTTTCTATACAGAAGATGAGAATACTGCATTTATCAGAATTAGAATTAATTATAATGGCAGTCCAGTTGATTTAACTAAAACAGATATGAAACCTAAACTCGATTTATTTATGGAAGATGGTTCTGTATTCATTGATGAAACAATTGAAGTATTAATTCCTGAAATTGGTTTGATCAAATATGACATACCTTCTAACGTGATTAAACACATTGGGAAAGTGAATTGTAAGTTATTTATGGACAGTCTTGAACATTCCGTTCATGTAGCTAACTTCTCATTCACTATTGTTGATAGTGGCGTAGAAGAAGCAGTAGCCAAAGAAGTTAATTTAAATATAGTTAAAGATACAGTGAAACAAATCATGTCTGAAGATTTAGTTGATTTATTAAACGATGGTTTCAAAGATAAGTTAACTGGTGATTTAGAGAATTATTTATCTACACATAATGAAGAATTTAAAGGTCCAAAAGGTGACAAAGGACCTCAAGGAGAACAAGGTCCACAAGGGTTGCAAGGAGAACAAGGTATTCAAGGAGAAAAAGGAGAACAAGGTCCGCAAGGTGCTACTGGTCCACAAGGCCCACCTGGAAAAGATGGTAGAGATGGCGTCGACGGTAAATCTTTTGCTTATGATGACTTCACACCAGAACAACTTGATAAATTAAAACCAGAATTGCCAGATTTTTCAAAGTGGCAGAAATATAAGTTGACTAATGATGATGGTAACCAAATAGCTACTTTCGACAGTGATAATAGAATGACCAATGAAAACCTACTGTCTACCCCAACAGGTTTTTATTATAACTACGAATATGACGATTCCCCTAATGGTTCCGAGGGGGTTGTTTATGTAATGGAATATACTGATGAGTGTAAAAAAGTATACTATTCTTCATATAGGTATAACGATTTATATGTTAAAACTTATCATCCCGATTTTGGATGGCTAGAATGGGAAGAAATAAGTAATGGCTACACTGATACTGGTTGGATTCCACTAGCAATTAAAAATGACTATGAAATAATCACTAACCTAAATTATGAACAGTCTTATCGTGTGATTGATTATGGTAATTTTAAAAAAGTATCTGTTCGTTTAGGCGTAATTGATAATTCGCCGAGTAACCACAGCGTTGTCGCATCTATCCCTGAATACCTCAACCCATACGATGTTTTTGGTTATGGAGTGTCAACTACTCAAGGTGGTAGACCTGTAACAGTAACAATAGTTGACGGCGATATAATGTTGTACTCTAACAGTTTCGCCAGTTCTATGAACACTTACTATCAAGGAGAATGGATAATATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5a1761729a83f35b7083de6e86bed7511023639fa75ba8dc93ceae91edfc982b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8057
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50