Protein

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Genbank accession
QFR59298.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,92
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSKKAKEVKAVKVAETKTVDGLEDNVQNEQEESDTQDSSCVFSALIEPSSPPIVELENVEVKPKYVLDNITNKPKLKVGDKEIELKEVQLTSDHFFNVNSFRSSPRHYHFSNHYSENEMRKVEGEPKWYGAEVNGVQFFLTQGSVVDLKRLDNQTGYGGPNTDGRKPCVKVTYSTIITDNLSIRGFEENRLFNVGLTGEWICIDNVSLSDGKVEIENSIDLTNVSLSVFSITRTNSLDLNQFNGSRISLKGFNSIRIYNSSCYCHFENSFILDLPNKKMVNLSIGKTTLSDFKFINYNHNLCEGLDVNSKIVIDKRIDYGYITGLKPVPFVRVGRSGILVGSQYFTAVEMLGKINTATLHEITPISPWYPTPTFGSPRALDPLVGRDVADKAYSVAFNSGYKGKVPEHQPDQLVVDIVQTTIDQIRSKVKVFALIDTLISGDFEYDDEYPY
Physico‐chemical
properties
protein length:451 AA
molecular weight: 50642,48890 Da
isoelectric point:5,37023
aromaticity:0,09534
hydropathy:-0,36608

Domains

Domains [InterPro]
DC_0897
STR
1–441
DC_0897
Coil
Unmapped
12–32
Coil
QFR59298.1
1 451
Architecture
STR
STR 1-441 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QFR59298.1
1 451
Domain Start End Length (AA) Confidence
N-terminal 1 295 295 0,3069
Central domain 296 440 146 0,4744
C-terminal 441 451 10 0,9554
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-295
Central
296-440
C-terminal
441-451

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage PS2
[NCBI] 		2653650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas hydrophila subsp. hydrophila
[NCBI] 		196023 Pseudomonadota > Gammaproteobacteria > Aeromonadales > Aeromonadaceae > Aeromonas > Aeromonas hydrophila subsp. hydrophila

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QFR59298.1 [NCBI]
Genbank nucleotide accession
MN453779 [NCBI]
CDS location
range 156819 -> 158174
strand +
CDS
ATGTCTAAGAAAGCTAAAGAAGTTAAAGCGGTTAAAGTCGCTGAAACCAAAACTGTGGATGGGTTGGAAGACAACGTACAAAACGAACAGGAAGAATCTGATACCCAAGATTCTTCCTGTGTTTTTTCTGCCTTAATTGAACCATCTTCACCACCTATTGTAGAACTGGAAAATGTCGAGGTTAAACCTAAGTACGTGTTGGATAACATAACCAACAAACCAAAGCTGAAAGTTGGTGATAAAGAAATTGAGCTTAAAGAAGTTCAACTGACCAGTGATCATTTCTTTAATGTTAATAGTTTCCGTAGCTCCCCAAGACATTATCACTTTAGTAATCATTACAGTGAAAATGAAATGAGAAAGGTTGAAGGCGAACCTAAGTGGTACGGCGCGGAAGTTAACGGAGTCCAATTCTTCCTGACCCAAGGTTCTGTTGTAGACCTTAAACGCCTAGATAACCAAACCGGTTATGGTGGACCCAACACCGATGGTCGTAAACCTTGTGTTAAGGTTACTTATTCTACTATCATTACTGATAACCTTTCCATTCGTGGATTTGAAGAGAATCGACTGTTTAATGTCGGATTAACTGGCGAGTGGATTTGCATTGATAATGTTTCTTTGTCAGATGGTAAAGTAGAAATTGAAAACTCCATAGATCTTACAAATGTGAGTCTAAGTGTTTTCAGCATTACTCGTACAAACTCTCTCGATCTTAACCAGTTTAACGGTAGTAGAATTTCGTTGAAAGGGTTTAATTCGATCAGAATTTACAACAGTAGCTGCTACTGTCATTTTGAAAATTCTTTCATTCTTGATTTACCAAATAAGAAGATGGTCAATCTTTCCATTGGAAAGACCACTCTTAGTGATTTCAAGTTTATTAACTATAATCATAATCTTTGCGAGGGGTTAGATGTTAACTCCAAAATCGTTATAGATAAACGTATTGACTATGGTTATATCACTGGTCTGAAGCCTGTTCCTTTTGTGCGTGTTGGTCGCAGTGGGATCTTGGTAGGTAGTCAGTATTTTACCGCTGTAGAAATGTTGGGTAAAATCAATACAGCTACTCTGCACGAGATCACACCTATCTCTCCGTGGTATCCCACTCCTACCTTTGGTTCTCCAAGAGCTCTAGATCCATTGGTTGGGCGTGATGTTGCTGATAAAGCTTATAGCGTAGCTTTTAACTCTGGTTATAAAGGTAAGGTTCCTGAACATCAACCTGATCAACTTGTAGTAGATATTGTCCAAACCACAATTGACCAGATTCGTTCCAAAGTCAAGGTTTTTGCTTTGATTGACACTCTAATTTCTGGTGACTTTGAATATGACGATGAATACCCCTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
9baa98c699c99270ed6c40ee30ab296a607337e0c6ce1032d71dc263b1256ed5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4282
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Aeromonas hydrophila bacteriophage PS2 Rai,S., Tyagi,A., Kumar,N. and Singh,N. 2020-04-30 — GenBank