Protein

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Genbank accession
ADK37881.1 [GenBank]
Protein name
putative tail fiber protein H
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MTTKLEENAKLREMIDALETAKNDLQVGKNNIANILGLPFTGNDKLETTKNTLNSIRSTFVSNLNKKGVSTFANTPFKILAENVGKVEQGNMIVPPWYVPKNVFIEALSTYAKNGIACVSAEKKIYFINGYAATSDSNNLCYDAILNTTTTKNTPSSFSKSALIFYNGYIYKLGGFSGYSAPTTICQKYNILTNSWTEIANMPTARGSACCEMYSNQIHVLYGGEDSSSSQAVRVVEYYNTTLNTWSTKSTIIDSKQSHYFVCAKVSVYKIVVFGLRSSISAHYLTTINYDPVSGTSSKAGEGFDSNTFAVPLGSTLYVSDYGYKAGSGKCGVVIFSDSGIKKLTFDKGTVPSYSYFGASVDGRQIYFILNGKITCFIPEL
Physico‐chemical
properties
protein length:381 AA
molecular weight: 41622,66200 Da
isoelectric point:8,77984
aromaticity:0,11811
hydropathy:-0,12677

Domains

Domains [InterPro]
Coil
Unmapped
1–31
Coil IPR015915
DC_1978
STR
1–222
DC_1978
PTHR24412
Unmapped
111–321
PTHR24412
IPR015915
STR
112–302
IPR015915
IPR006652
STR
165–203
IPR006652
IPR006652
STR
169–216
IPR006652
ADK37881.1
1 381
Architecture
STR
STR 1-344 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ADK37881.1
1 381
Domain Start End Length (AA) Confidence
N-terminal 1 96 96 0,8661
Central domain 97 295 200 0,1241
C-terminal 296 381 85 0,8683
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-96
Central
97-295
C-terminal
296-381

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCD6356
[NCBI] 		864178 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ADK37881.1 [NCBI]
Genbank nucleotide accession
GU949551 [NCBI]
CDS location
range 16727 -> 17872
strand +
CDS
ATGACAACGAAATTAGAAGAAAATGCAAAACTAAGAGAAATGATAGATGCATTAGAAACTGCAAAAAATGACTTGCAAGTAGGTAAAAATAATATAGCTAATATTCTGGGCTTACCTTTTACAGGAAATGACAAGTTAGAAACAACTAAGAATACATTAAATTCAATTAGAAGTACTTTTGTTTCAAATTTAAATAAAAAAGGTGTGTCAACATTTGCTAATACACCTTTTAAAATTTTAGCTGAAAATGTAGGGAAGGTAGAACAAGGCAACATGATTGTTCCACCTTGGTATGTTCCTAAAAATGTATTTATTGAAGCTTTGAGTACTTACGCTAAAAATGGAATAGCATGTGTTTCAGCAGAAAAAAAAATCTACTTTATAAACGGTTATGCAGCTACGTCGGATTCAAATAACCTTTGCTATGATGCTATTTTAAACACAACAACAACTAAAAATACACCTAGTTCTTTTTCGAAGTCTGCATTAATTTTTTATAATGGATATATCTATAAATTAGGTGGTTTTAGTGGCTATTCAGCTCCTACAACTATATGTCAAAAATATAATATTTTAACTAATTCATGGACTGAAATAGCAAATATGCCTACCGCAAGAGGAAGTGCTTGTTGTGAAATGTATTCAAATCAAATACATGTTTTGTATGGCGGAGAAGATTCTTCTTCATCTCAAGCAGTTAGAGTTGTTGAGTATTATAATACAACGTTAAATACTTGGTCTACAAAATCAACTATAATAGATTCAAAACAATCGCATTATTTTGTTTGTGCTAAAGTCAGCGTTTATAAAATTGTTGTGTTTGGGCTAAGAAGTTCTATTTCTGCTCACTATCTTACAACAATCAATTATGACCCTGTAAGCGGAACTAGCAGTAAGGCAGGAGAAGGCTTTGATAGTAATACTTTTGCCGTACCACTAGGTTCAACTTTGTATGTGTCAGATTATGGTTATAAAGCTGGAAGTGGCAAATGTGGAGTTGTTATTTTTTCTGATAGTGGAATTAAAAAATTAACTTTTGATAAAGGAACTGTTCCCAGTTATAGCTATTTTGGAGCTTCGGTTGATGGTAGACAAATATATTTTATTTTAAATGGTAAGATTACTTGTTTTATACCAGAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ae595e2e3bb7adddd1b7e7972f2dc883129961f71dd768b7a49c94b157593b94
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7711
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of the Clostridium difficile phage PhiCD6356, a temperate phage of the Siphoviridae family Horgan,M., O'Sullivan,O., Coffey,A., Fitzgerald,G.F., van Sinderen,D., McAuliffe,O. and Ross,R.P. 2010 20438817 GenBank