Protein

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Genbank accession
QKE55318.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQISKYNLDKQELNTRLTGIDSSIQSNVEAIGNINIAIGSINSTLNTKAATGANNDITELNALTKAITVAQGGTGASTAENARVNLDLNRFKQLPGETLVYSPYATNYLTVGEGTTWGVYSTASGTFIPLPIQSGGTGASTPAEALTKLLDGKPLALAADGQAPYDAVTVRQLANISGGGNASMSGVMNNFIGAVEWFNGNRTKLPAGYIPADGQLVSRTDAKTADLWSAVSSGLFYAVSDALWINSGDPVRPCAWRASYSTGDGSTTFRVPDLNGTQLNSIKHLFLSGSSGATNEPSANQVWNQVAPNITGTFYTHGSNADAIDAMGAFYLNAQDTGSSLTIGGTDKGDHLGFSASRSSKTYGRGVAYQSDPGGTGPIGDLYPNHAAGIWIIRANGSFNAAGSQYHVINGDSTRPADGTTTYGGFTYSDYRVGEAVNHSALIVSAKRFGNPYSVAVLQAHNRENGDLANFEVQSNGVVNLPTSINNKSWIKASGANGLHLEAATTTTDLHTMPGGGCGVSAAERNAIELNNAPGAVGSGGYVNWLQGWWYDDRFQFGTVRSGSVVLDAVALTIYSNTFGLKQWFFRANDGRIASTAGTIAIEGSDIKLKENIVRASEGALDRITKITPREFDWKAGGRHDRGYIAQELRDVDPTYVYSSTVGEGEEVLNVSTSALISDLIAAVTTLKQELDSAKLEIKKLKAK
Physico‐chemical
properties
protein length:747 AA
molecular weight: 78554,22060 Da
isoelectric point:5,67824
aromaticity:0,08166
hydropathy:-0,19772

Domains

Domains [InterPro]
DC_0017
STR
1–747
DC_0017
IPR030392
CHP
648–741
IPR030392
IPR030392
CHP
648–700
IPR030392 Coil
QKE55318.1
1 747
Architecture
STR
STR 1-747
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKE55318.1
1 747
Domain Start End Length (AA) Confidence
N-terminal 1 131 131 0,9880
Central domain 132 330 200 0,1137
C-terminal 331 747 416 0,9404
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-131
Central
132-330
C-terminal
331-747

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ECOP18
[NCBI] 		2713223 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKE55318.1 [NCBI]
Genbank nucleotide accession
MT080103.1 [NCBI]
CDS location
range 105124 -> 107367
strand -
CDS
ATGTCACGTAATTTAATGCCAAAATCTGGCGCAATGGCGCCTTACGTTGTAGTTAACAGAGACGCAGCAGTAGCTGGTGTTTTCTCTGTTGATGGAGAAGCTGGTGCTGTTGTACTAACTTCCAAATACTTACAAATATCTAAATATAATTTAGATAAACAAGAATTAAATACTCGTCTTACTGGCATAGATAGTTCCATTCAGAGCAATGTAGAGGCTATTGGCAATATTAATATTGCAATTGGTAGTATTAATAGTACTCTCAACACTAAAGCTGCTACAGGTGCTAATAACGATATTACTGAACTAAACGCACTTACTAAGGCTATTACGGTTGCTCAGGGTGGTACAGGGGCTAGCACTGCGGAAAACGCTAGAGTTAACTTAGATCTTAATAGGTTTAAGCAGTTGCCCGGCGAAACTCTGGTATATAGTCCCTATGCGACAAACTATCTTACTGTTGGTGAAGGTACTACCTGGGGAGTTTATAGTACAGCTTCTGGTACATTTATACCTTTACCTATTCAATCTGGTGGTACCGGTGCTAGTACTCCTGCGGAGGCCTTAACTAAGCTGCTAGATGGTAAACCTCTAGCATTAGCCGCCGATGGTCAAGCACCTTATGATGCTGTTACTGTTCGTCAGCTAGCTAATATTTCTGGTGGCGGCAACGCTAGCATGAGTGGGGTTATGAATAACTTCATTGGTGCTGTAGAATGGTTTAACGGTAACCGTACTAAACTGCCAGCCGGCTATATACCAGCAGATGGTCAGTTAGTTAGCCGTACTGATGCTAAAACAGCAGATCTATGGTCTGCGGTATCTAGTGGTCTATTTTACGCTGTTTCCGACGCTTTATGGATTAATAGTGGGGATCCTGTTAGACCCTGCGCTTGGAGAGCTTCCTACTCTACTGGTGATGGTTCTACTACTTTCCGAGTTCCAGATCTTAACGGTACTCAGTTAAATAGTATTAAGCATTTATTTTTATCTGGTAGTTCAGGTGCTACTAATGAACCTTCGGCTAATCAGGTGTGGAATCAGGTTGCCCCCAATATTACTGGTACTTTCTATACTCATGGTAGTAACGCAGATGCTATAGATGCCATGGGGGCTTTTTATTTAAATGCTCAAGATACAGGTAGTTCCCTTACTATAGGAGGTACAGATAAGGGAGACCACTTAGGATTTTCGGCCTCTAGAAGTAGCAAGACATATGGTCGTGGTGTGGCTTACCAATCAGACCCTGGCGGTACCGGCCCTATTGGTGATCTATACCCTAACCATGCAGCAGGTATTTGGATTATCCGTGCTAACGGTTCTTTTAACGCTGCTGGTTCACAGTATCATGTTATTAATGGAGATTCTACACGCCCTGCTGATGGAACTACTACTTATGGTGGCTTTACATATAGCGACTACAGAGTAGGGGAAGCAGTTAATCACTCAGCTTTAATAGTAAGTGCCAAAAGATTTGGTAATCCTTATAGTGTTGCTGTTCTACAAGCGCATAATAGGGAGAATGGGGATCTTGCTAACTTTGAAGTACAATCTAATGGTGTTGTTAACTTACCTACTTCGATTAATAATAAATCCTGGATAAAAGCTTCGGGTGCCAACGGCCTACATTTAGAGGCTGCTACTACTACTACGGATCTACATACTATGCCCGGTGGGGGTTGTGGTGTATCTGCGGCAGAGAGAAATGCTATCGAGTTGAATAATGCCCCAGGTGCTGTAGGTTCTGGTGGTTATGTTAACTGGCTGCAAGGATGGTGGTATGACGATAGGTTCCAGTTCGGGACTGTTCGTAGTGGTTCTGTTGTATTGGATGCTGTAGCCTTAACTATATACTCTAATACATTTGGGTTAAAACAGTGGTTCTTTAGAGCTAATGATGGTAGGATTGCTTCCACTGCAGGTACTATTGCTATTGAAGGTTCGGATATCAAACTTAAGGAGAATATAGTTAGAGCATCCGAAGGGGCCTTAGATAGAATAACTAAAATCACTCCTAGAGAGTTTGACTGGAAAGCTGGAGGTAGGCATGATAGAGGATATATTGCTCAGGAATTACGTGATGTAGATCCTACCTATGTATACTCATCAACTGTTGGGGAAGGAGAAGAGGTATTAAATGTTAGTACATCTGCTCTGATTTCTGACTTAATAGCTGCTGTTACAACTCTTAAACAAGAGTTAGATTCTGCCAAATTAGAAATTAAAAAGCTGAAAGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c0f5440b46d6a5bbb37e0f751c2d5b85736210e2e400c43109ab0f05912769aa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6610
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and genomic study of ECOP18 phage Lee,J.-H. and Yoo,B.-E. 2023-05-12 — GenBank