Protein

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Genbank accession
YP_010053894.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,85
Protein sequence
MLDEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVYEPYAFDDVDGQELYGPNELNTNPPPVVIETATTTTVTETEFAGGQIAVKIPKDSEFDYFVDLTMPHDVVFKLNITYAQGGGASVTENITLSGRLISATETDDGGLPPVNYWYTFIINSINYSGAPISSLNGVTINKTYFNLTDNQPIVSGPYFSPIDGDQLWVHLQHQTNDGNDFSVLIEWWKIDDDNVQIPGTYQSMNYYQDVDRNDTFYYTIKLTPSAGTGRYAIQMRRTNNSSDTSILQLEEIHSIVTRTNVSYPDDTVVKVVVRATENATGSRDRKYNALITRHTIGYNRDTGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGCFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITDNGIVEGEPTKAKKFDMLYIRNRYQAVDRAILECRRLIYSRRSMEIKALSDGEYVNVGDMIQVVDMYDDVQQTGVIEARNGNVFTTSEQLTADDNLYVVITSSDGSTSDRLPATVTGLHTFTCNLPTDFQLNIWDGASVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYVIPSS
Physico‐chemical
properties
protein length:783 AA
molecular weight: 87604,95820 Da
isoelectric point:4,45097
aromaticity:0,10473
hydropathy:-0,41635

Domains

Domains [InterPro]
DC_0118
STR
1–625
DC_0118 DC_0808
NF040662
Unmapped
311–777
NF040662
YP_010053894.1
1 783
Architecture
STR
RBD
STR 1-625 | RBD 641-782 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VB_StyS_BS5
[NCBI] 		2686071 Uroviricota > Caudoviricetes > Skatevirus >
Host Salmonella sp.
[NCBI] 		599 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010053894.1 [NCBI]
Genbank nucleotide accession
NC_054646 [NCBI]
CDS location
range 21252 -> 23603
strand +
CDS
GTGCTTGATGAAGATGATGAGCTTTCATTCTGTCTGCGCGATGGCGACGTGGTCAACGTTTATTGCCAGCCGTCCGGCGCAATTGGCGACCTTATCGGTGCGATACTGAAACCAGTAACGAAGATTTTCTCATTCCTTACGCCGAAAGTATCCACACCAAAAACTGATACCAGCTCAAAAACATCACCGAATACCAGCCTAAAGGCGCAAACCAACATTGCGCGCAACGGCGAGGCGCGTCCTGATAACTTCGGGCAGATTCGCGCATTCCCTGATTTGCTTCAGGAATCATTATTTGAATACATCAACAATATTAAATATGTCACAGAGTTCATGAATTTTGGCCTCGGTAAATATGATGTATCATCCGTGCGTTATTCTGAGTCAAACCTCGGTTCACTGGCTGGCGCTAGCTATACAATTTATCAGCCGGGAGAAGTTATTCCTGTTGTGTATGAACCTTACGCATTTGATGATGTTGACGGTCAGGAACTGTACGGGCCAAACGAACTTAACACCAACCCTCCGCCAGTGGTCATTGAAACTGCAACAACAACCACGGTCACAGAAACGGAATTTGCTGGAGGCCAGATAGCTGTCAAGATACCGAAGGATTCAGAATTCGATTACTTCGTTGACCTAACCATGCCGCATGATGTGGTATTTAAGCTGAATATCACTTACGCACAAGGAGGCGGTGCATCTGTAACCGAAAACATCACGCTATCAGGAAGGCTTATCTCCGCTACCGAAACTGATGATGGAGGTTTACCACCAGTTAATTACTGGTACACATTTATTATTAACAGCATCAACTACTCAGGCGCACCAATATCATCACTGAATGGCGTGACGATTAATAAAACCTATTTCAATCTGACAGATAACCAGCCGATTGTTTCCGGCCCGTACTTTTCGCCGATTGATGGTGATCAGCTTTGGGTGCACCTGCAACACCAGACCAATGATGGTAATGATTTCAGCGTCCTCATTGAATGGTGGAAGATTGACGACGATAACGTTCAGATTCCAGGGACATATCAGTCGATGAACTATTATCAGGACGTGGATAGGAATGACACATTTTACTATACGATCAAGTTAACACCATCTGCTGGCACTGGTCGCTATGCGATTCAGATGCGAAGGACAAACAACAGTTCCGACACGTCAATCCTTCAGCTTGAGGAAATTCACTCAATAGTCACGAGAACAAACGTCTCATATCCAGATGACACGGTGGTTAAGGTGGTTGTGCGCGCTACGGAAAATGCCACTGGCAGCCGTGACAGGAAATATAATGCGTTAATTACACGCCACACCATCGGATATAATCGCGACACTGGAACTGTGCGCTACACGCTTGCGCCATCCCGTAGCTTTGCTGATGCTGTTCTGCATAACTGGCTTATTACCGCTGGAAATCCAGAAAACACGATCGACATAGTGAAGCTGTATGAAATTGCCGACAGCCTGCCTGATGAGCGACTTGGTTGTTTCGACTATACATTCGATGATGAAGATAAAAGTATTGGCGAACGCCTGCAAACAATCTGCGATGCGGCGCGTGTTACTGCATTCTGGGATGATGGAGTGATGAGCTTCTCGCGTGATGAAAAGAGAGAATATCCGGCAACTGTATTTAATACCAGAAACACGCAGAGTGACGGTTACAAGCTGAGTTATGATATCAGTCTTCCAGGCACTTATGATGGCGTTAACGTCGAATATCGCGACCCAACAACGAATAAGCAGGCCAACGTTTACTATCGCATTACAGATAATGGAATTGTCGAAGGCGAGCCAACAAAAGCAAAGAAATTCGACATGCTTTATATTCGCAATCGTTATCAGGCTGTTGACCGCGCAATTCTTGAGTGTCGTCGCCTGATTTACTCCCGTCGTAGCATGGAGATTAAGGCTCTTTCGGATGGGGAATATGTGAACGTTGGTGACATGATTCAGGTTGTCGATATGTATGATGATGTGCAACAGACTGGCGTTATTGAAGCGCGCAACGGAAACGTATTCACAACAAGCGAGCAACTAACGGCTGATGATAATCTTTATGTTGTGATTACCAGTTCTGATGGCAGCACATCAGACAGATTACCAGCAACAGTGACCGGATTGCATACATTCACCTGCAACCTGCCGACTGATTTCCAGCTGAATATATGGGATGGAGCAAGCGTGCAATCTGAATCTCGCTATGTGCTGAGCACTGAAAAAGAACTGGATACCACTCTGTGGGTTGTCAGCCAGAAAAATCCAGGAAGTGACGGTACAACAACTCTGACCATGAGCGAATACAGTGATGACATGTACGAATATGTCATCCCGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d83c5030a310ef5cf11064cd761d527ff70cb13bcc0ac3699fe171e82e72134a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3028
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50