Protein

View in Explore

Genbank accession

WWA79516.1 [GenBank]

Protein name

central tail fiber J

RBP type

Evidence Phold

Probability 1,00

TSP

Evidence RBPdetect

Probability 0,70

Evidence RBPdetect2

Probability 0,96

Protein sequence

MRGLVNGYRSVYLQGTPLQNSDGTFNFQNVAVETRSGTQDQSYIPGFPSVENEVIVGVELRADTPIVRTVSGSDLSAVRVRVAVDSLQKVDTSNGDTVGYSVSYAIEVATDGGAYTTVLNSAFTGKTTTQYERSHRIDLPPGSQWQIRIRRLTPNANSSTVADTTRVQSITEIIDAKLRYPNSALLAVSVDAQQFQSLPTIACNVYGRIIKVPANYDPELRTYATTGPGTTNGVWNGTFKSAWTNNPAWVFYDIVTNDRFGLGNNIPAAWVDAWNLYQIAQYCDEMVSDGFGGQEPRFTCNVYMQTRADAYKVLQDLAAVFRGVSYYAVGQMIASADMPKQVSVGYTNADVVDGRFEYESSARKVRHTVALVSWSDQTDMGRQKVERVEFRPGLIRYGIQETEVTAIGCTSRGQAQRIGNHILVSENLERETIAFKVGLEGVLVSPGDVFNVSNRNRAGRRMGGRIGDFTADSVTVDQIPDDIIAGDTIKVMLSTGKIEARTIQSVSGRIVTVTVDWSASPAKQGVFIFEKTELVAETFRCMGVADNEDGTYTISGLSYRADKFAYIDDGTRLEQPPISVIPPSVQAPPANVALTSFSVIDQAIARTDVTIQWDAAPNAIEYEVEWRRDDMDWVRMGRVSSTSVDIRGAYSGQYLARVRAVNALGARSIPATSMLTQIDGKTTPPPSITSLTTTSIVFAIGLRWGFPQGATDTERTEIWYSQGPDRASAIKLGDFAYPQDRHQINGLAAGAKFYFWGRLIDRSGNIGPWYPTDTGVVGESSIDQTEYDAYFSGRITESALGQDLLSKIDSIDNIVPLIWDANATYEEGQTVIYDGRIYSWTNTTPGNNQPPSADWQDVGEAIAQAGAIVGRVDQLELDVSEIEGQVVAQGQKVDGLFASIDTQFTGDEDDYTADNDVFAGTTTIQTVIATQDYALGKRVETVQASVGDVSDELNYVSASVQETSQALVDLDGQISASWTLKLQIAANGQYYAAGMGVGIENQPDGSFQSQILMQADRFAVINVANGQVTSPFVIQGGQTFISQALIGTSWITNAMIANAAITNAKISGTIQSDDYVSGQTGWRINKAAGGGFEFNGSIAGGYRLNITNQGVYIYYPNGNPAVELGVLL

Physico‐chemical properties

protein length:	1128 AA
molecular weight:	122430,71450 Da
isoelectric point:	4,61330
aromaticity:	0,09131
hydropathy:	-0,20683

Domains

Domains [InterPro]

IPR053171
Unmapped
2–907

IPR053171 IPR015406

DC_0014
STR
3–1127

DC_0014

IPR055385
ATT
50–176

IPR055385 IPR032876 IPR013783 G3DSA:2.10.10.20

IPR003961
STR
588–686

IPR003961 IPR036573

IPR003961
STR
588–673

IPR003961 cd12215

IPR036116
STR
602–674

IPR036116

WWA79516.1

1 1128

Architecture

STR

ATT

STR

ATT

STR

ATT

STR

STR 3-49 | ATT 50-176 | STR 177-306 | ATT 307-466 | STR 467-815 | ATT 816-861 | STR 862-1127 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR053171	Unmapped	-	2	907	InterPro	Viral Tip Attachment Protein	-	-	-	-
DC_0014	STR	DC_0014	3	1127	Novel HMM	DC_0014	Central	Low	Positional only	830 proteins / 830 hits
IPR055385	ATT	DC_0360	50	176	InterPro cluster	Tip attachment protein J, HDII-ins2 domain	N-terminal	High	Text match	1136 proteins / 1139 hits
IPR032876	ATT	DC_0307	307	466	InterPro cluster	Tip attachment protein J	Central	Medium	Text match	1111 proteins / 1112 hits
IPR013783	STR	IPR013783	587	678	Merged direct domain	Immunoglobulin-like fold	Central	Low	Positional only	144 proteins / 144 hits
IPR003961	STR	DC_0003	588	686	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR003961	STR	DC_0003	588	673	InterPro cluster	Fibronectin type III	Central	High	Text match	998 proteins / 1603 hits
IPR036116	STR	IPR036116	602	674	Merged direct domain	Fibronectin type III superfamily	Central	Low	Positional only	52 proteins / 52 hits
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	816	861	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
IPR036573	STR	IPR036573	818	859	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
cd12215	STR	DC_0226	819	857	InterPro cluster	ChiC_BD	Central	Low	Positional only	1 proteins / 1 hits
IPR015406	RBD	DC_0135	960	1103	InterPro cluster	Tip attachment protein J, central straight fiber domain	C-terminal	High	Text match	1265 proteins / 1266 hits

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout

N-terminal

Central

C-terminal

WWA79516.1

1 1128

Domain	Start	End	Length (AA)	Confidence
N-terminal	1	466	466	0,8304
Central domain	467	1067	602	0,0421
C-terminal	1068	1128	60	0,9470

Note: Constraints were applied during segmentation.
Fixed 70 C-terminal predictions appearing before Central domain

Legend: N-terminal Central domain C-terminal

3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring

N-terminal
1-466

Central
467-1067

C-terminal
1068-1128

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Xanthomonas phage Kintu [NCBI]	3120010	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Xanthomonas vasicola pv. musacearum [NCBI]	454958	Pseudomonadota > Gammaproteobacteria > Lysobacterales > Lysobacteraceae > Xanthomonas > Xanthomonas vasicola

Coding sequence (CDS)

Genbank protein accession

WWA79516.1 [NCBI]

Genbank nucleotide accession

PP313117.1 [NCBI]

CDS location

range 19453 -> 22839
strand +

CDS

ATGCGTGGGCTTGTCAACGGCTATAGGTCCGTATACCTGCAAGGCACTCCGCTACAGAATTCAGACGGCACATTCAACTTCCAGAATGTAGCTGTTGAGACGCGCTCAGGCACTCAGGATCAGTCTTATATCCCTGGCTTCCCAAGTGTGGAGAATGAGGTAATCGTCGGGGTAGAGCTTCGCGCTGATACCCCTATTGTCCGCACCGTATCGGGATCGGACCTTTCTGCCGTTCGTGTCCGCGTGGCGGTAGATTCTTTGCAGAAAGTTGATACCAGCAACGGTGACACGGTTGGCTATAGTGTCTCCTATGCTATTGAAGTGGCTACAGATGGTGGTGCATACACCACCGTATTGAATAGCGCCTTCACTGGCAAGACAACCACTCAGTATGAGCGCAGCCATCGTATTGACCTTCCCCCCGGCAGTCAGTGGCAAATCCGCATCCGCCGCCTGACGCCTAATGCGAACTCTTCTACGGTTGCTGATACTACTCGCGTCCAGTCGATCACTGAGATTATCGACGCCAAGCTGAGGTATCCGAATAGCGCACTCTTGGCTGTGTCTGTTGATGCTCAGCAGTTCCAGAGTCTTCCTACGATTGCCTGCAACGTATATGGCCGAATCATCAAGGTTCCGGCTAACTACGATCCCGAGCTAAGGACATACGCCACTACTGGCCCTGGCACTACTAACGGCGTCTGGAACGGCACATTCAAATCAGCATGGACTAATAACCCAGCATGGGTATTCTATGACATTGTTACCAATGACCGATTTGGCCTAGGCAACAACATTCCTGCTGCATGGGTAGATGCGTGGAACCTGTATCAGATCGCGCAGTATTGCGATGAGATGGTTTCGGATGGCTTTGGTGGACAGGAGCCTCGCTTTACCTGCAACGTCTACATGCAGACCCGCGCTGACGCCTATAAGGTGCTTCAGGACTTGGCTGCGGTTTTCCGTGGAGTAAGCTACTACGCCGTAGGGCAGATGATCGCATCCGCCGATATGCCTAAGCAGGTTTCGGTTGGATATACGAATGCAGATGTTGTTGATGGCCGTTTTGAATACGAAAGCTCAGCCCGTAAGGTCCGCCATACCGTTGCGCTTGTGTCGTGGTCAGATCAGACAGATATGGGGCGTCAGAAGGTTGAGCGCGTTGAATTTCGACCTGGCCTGATCCGCTATGGCATACAAGAGACTGAAGTAACCGCCATTGGCTGTACGTCTCGCGGGCAGGCTCAGCGCATTGGTAATCACATTCTAGTATCTGAGAACCTTGAGCGCGAAACGATTGCGTTTAAGGTTGGCCTAGAAGGTGTGCTTGTATCGCCTGGTGATGTTTTCAACGTCTCCAATAGAAACCGCGCCGGTCGCCGCATGGGTGGCCGTATCGGCGATTTCACTGCCGATAGCGTAACTGTCGATCAAATCCCTGATGACATTATTGCAGGTGATACGATTAAGGTAATGCTATCGACTGGAAAGATCGAAGCTAGGACTATTCAATCTGTGTCAGGTCGCATTGTCACTGTTACTGTAGATTGGTCAGCAAGTCCTGCTAAGCAAGGTGTTTTCATCTTTGAAAAGACTGAGCTTGTGGCGGAAACATTCCGCTGTATGGGCGTGGCTGATAATGAGGACGGAACCTATACGATTTCCGGACTATCCTATCGAGCAGACAAGTTTGCCTATATCGATGATGGCACACGTCTAGAGCAGCCGCCTATCAGCGTCATCCCGCCTAGTGTCCAGGCTCCTCCTGCGAACGTTGCGCTTACTTCATTCTCTGTTATCGACCAAGCGATTGCCCGCACTGATGTTACTATCCAGTGGGATGCTGCGCCTAACGCCATCGAGTATGAAGTTGAGTGGCGTCGAGATGATATGGATTGGGTGCGCATGGGCAGGGTTAGCTCTACTAGCGTAGACATTCGCGGAGCTTACTCAGGCCAATACCTTGCGCGTGTGCGTGCAGTCAATGCGCTTGGGGCCAGGTCGATCCCAGCGACTAGTATGTTGACTCAGATCGATGGCAAGACTACCCCGCCGCCGTCCATTACCTCGCTGACAACCACTAGCATTGTGTTTGCCATTGGCCTGCGCTGGGGCTTCCCGCAAGGTGCAACAGACACAGAGCGCACTGAGATTTGGTATTCGCAGGGTCCAGATAGGGCTAGCGCGATCAAGCTTGGTGACTTTGCCTATCCGCAGGATCGTCATCAGATCAACGGGCTTGCTGCTGGTGCTAAGTTCTATTTTTGGGGTCGCTTGATTGATCGCAGCGGGAATATAGGCCCTTGGTATCCTACGGATACGGGCGTTGTCGGTGAATCTAGCATCGATCAAACTGAATATGATGCTTACTTCTCTGGCCGCATTACTGAAAGCGCGCTTGGTCAGGATTTGCTGTCTAAGATCGACAGTATCGACAACATCGTACCTTTGATTTGGGACGCTAATGCAACCTATGAGGAAGGCCAGACAGTAATTTACGATGGCAGAATCTATAGTTGGACCAATACAACTCCTGGCAACAATCAGCCCCCTAGTGCTGACTGGCAGGACGTTGGTGAGGCTATTGCGCAGGCTGGCGCTATCGTTGGGCGAGTGGACCAGCTTGAACTTGACGTGTCTGAGATTGAGGGCCAAGTAGTTGCTCAGGGCCAAAAGGTAGATGGCCTATTTGCTTCTATCGACACTCAATTCACTGGCGACGAAGACGACTACACTGCTGATAATGATGTATTTGCTGGCACTACTACGATTCAGACAGTAATCGCTACCCAGGACTATGCGCTAGGAAAGCGAGTAGAAACTGTGCAAGCCAGCGTTGGCGATGTTTCGGATGAGCTAAATTATGTATCTGCTAGTGTCCAGGAGACTTCTCAAGCTTTGGTTGATCTTGATGGGCAGATCAGCGCATCGTGGACACTGAAGCTACAGATTGCCGCAAATGGGCAGTATTACGCCGCTGGTATGGGTGTTGGCATCGAGAACCAGCCTGACGGCAGTTTCCAGTCTCAGATTCTCATGCAGGCTGATAGGTTCGCTGTAATTAATGTTGCCAATGGGCAGGTAACTAGTCCGTTTGTCATTCAAGGCGGTCAGACATTCATCAGTCAGGCGCTAATCGGCACTAGCTGGATTACCAACGCCATGATTGCCAATGCGGCGATCACCAATGCCAAGATCAGCGGTACAATTCAATCCGATGACTATGTTTCGGGCCAGACGGGATGGAGAATTAACAAGGCTGCTGGCGGTGGGTTTGAGTTTAACGGCTCTATCGCTGGCGGATACCGCTTGAACATCACCAACCAAGGCGTATATATCTACTACCCTAATGGTAATCCGGCTGTTGAATTGGGAGTGCTGCTGTAA

Genome Context

Tertiary structure

PDB ID

c3a539f4aee8be88b0688ba5e1f6f3d527b8167f56377bf97678d7c2cb602040

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,7968

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

3D Structure with Domain Coloring

Domain Coloring

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence