Protein

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Genbank accession
AJF40891.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,65
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MADLIIKEPVLDGQQTGPVSIEVEGLNSTATILDSLLNGQGSEIHVAVDEGLQVVGLESLVELQAQLGAIEGRVNEALQSIDNAVELANDTVDQLNQAAADLLALVVRAETASDNAKSSELAAAASQVAARASELAAAASQAAAAASATNSANSATAANNSKNAAASSASAALASQNAAKTSETNSKTSETNAASSASAANTSKNAAATSATNASNSASDALASKNAAATSASQASASQIAASNSATAAAASQSAAANSASEANTSKNAAATSATNAANSATAANNSKNAAATSEANSAANASAATAAKNLAQKYATAPEDEVVELGRYSAFHWAEKAKHFAQQTFVSAGTYNPTTANPYPSVTGVTRDTMWLIKITDPSGRFTYTTGVLAGTTVTNGDFLFYDTPANTWEHIPVGIAGVLEVNGKSGQSVTLTAQDVGALPITGGNISGLVSAHRFTARVGSEIGIVIGGNASAAWITPVKSDGSNDFANQLAFNPTTGYWTAQGHKIYTAGQKPTFTDLSDSGLWLAPNAGRIRVGGNTDLVAGREDKGFLPRKEGVGAAAVSYLGTTDWWFGEAWVNSYRGGSVNVTGEVRSTKSSVRDWSFSQHSNGNLELRHGVDNTISLYIVDESKAFYAQGALFENGSSRVYSTGNKPTAADVGAVSITGGDIAGSLLIADHSSAYTARMMFTNSSGTAYIQAGSSSNNAGRIVFSKAFTSNESLESVSFLVSDNNLRVNGHKVYHQGFKPTLTELGAAAKAGDTFTGEVIFGTADPIYISPYKESYSFSNQGSTKADVFTTYTSTGTSEFRPFIKQRGTHTPSNTTYVSALGQLLGSSGVTSTVLHMIKSDGTGGKTWEFSKDGHFVLSASGEVRTDAVRLRTTTGGLVNNSGSNIARPGGAGQATILGNTVETTYIDSLGTITVRKAGSATEGRIYTSLDKPNASEILGGTFSGSFIFGTGGGVGTRFGSTTHKAIVASSPASGEYIFGGSSTGTTTPDDYIRVGRNKLQYETGGSVRDIFHSGDGHIYQTTVIGAPTGATTGKLYPVVFSGLSAMLLTQEIMISTRSSGGSDPMNNCSFKGNVKVGGWSDSGSYVDGVFRIYPSTERAIHSVWANSENTSSYAFYVDGAAFPVTVTHISGITIQTGTTSVAVSESVYNAGVTTPAGTKITQLADFSKGSGRYYNGGLVYHEGFKPSATDVGAVPGSTKAAFIPAGTTANRPASGEFPANTRALRFNTETNQAELVDAAGTVLPLGGSGSGSGVPPFIVRTASFTVVKNQAYSLSMADGVNKTVTVPSGFTNSDWFVVDLTKWDRGLAGLTATINFGTERITNGVEDFSELSIDRPCVAYFQKINGKWQWVDGVGTDGSYNALESRVEELEAEDVIFSGSLFNNNTASVADYSRYRYLLVTAASSFSGLEHVFNTTIPVASITPTKRFGLWTSYVSSVDSVSIYVDFPSETQIKAVAFQGSGWTAVAIKEVRGIR
Physico‐chemical
properties
protein length:1484 AA
molecular weight: 153508,87300 Da
isoelectric point:5,49993
aromaticity:0,08154
hydropathy:-0,14569

Domains

Domains [InterPro]
DC_0608
ATT
53–238
DC_0608 DC_0765 DC_1209 DC_1884
Coil
Unmapped
60–112
Coil
AJF40891.1
1 1484
Architecture
ATT
STR
STR
STR
ATT 53-238 | STR 256-476 | STR 582-723 | STR 1104-1474 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AJF40891.1
1 1484
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9348
Central domain 197 396 201 0,4729
C-terminal 397 1484 1087 0,8146
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-396
C-terminal
397-1484

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phi 3
[NCBI] 		1589298 Uroviricota > Caudoviricetes > Demerecviridae > Jesfedecavirus > Jesfedecavirus phi3
Host Vibrio cholerae
[NCBI] 		666 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)

No CDS data available.

Genome Context

Genome Context

Tertiary structure

PDB ID
9688512623e2764bf9413316b11416622cba9ea32654048c88e4b472344c3c45
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4983
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50