Protein

View in Explore
Genbank accession
AYN56740.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,73
TF
Evidence RBPdetect2
Probability 0,62
Protein sequence
MRLRKMATNTDGREEIKPVAPTEQTKWRDPSLVGKYMVDPKTGLAGLFRSPDNGETWVLTDTVYGHVYNQDEVDNIWDNGAAHKVADEIKSATADLPNVRKQADEAVKFAESAIAASKVNSDAIVAQSSAVVEAKSAMDSATAEIQQLKANAASDVAQIESTIAEVQAGVNQAKSANKSAVQAVQAELKLTSDSMDKVEKRLDEVDTSLDTYAKSATEQGHDITLIKQKQGQFEADFASAQGNVNQIQADIKGLRQNVKDNQGNIATLLTSADKLQASMTDAEKNISNLLLTASKYEQTFKDQDGRLSKVEQTATEHTSVLADAKGNIDKVTQKADNLQLLLSDAQKNIQNIQLDAKGLHDTLTGQNNQLASLNVTLNNLDSKYSGITGDLQSKQTALSTEQQQTKDMLLRKADRSEVDSVKGTVNQVSAEQKTMADQINQKVSSVEYQTLKDKVNGMKIGTRNLLHHSDTFDGWIKGYSVAVTADKYLDGRIAILGGAGVDGGQLTTFLDGPYNDDLVTWVVYARAENAGDKMHTELWGGGGCTDQSLTTKWQAYKFSGHRNIDHPDFYLWGCVGNKGNIYVALPFAVVGNYIGTWLANPTDTITSINKNATAIDENSKLISLMAKQTEVDNVKNTAQQISSRLDILAGEVKSKVDETRVNSIVDGKGYATTSTVQSLVDQKAGTLSDTITELDRKIGDNHSDSIKRIQSLTASIDGLQSRVTNYQNDTSSKYTQLSNMIQSKVSASDFNALKDKATWKSTDSIDLNTAVLQQKIFVKGGSNLPPGNYWWYVQVEPGYDSRIVQYAVSDRDNIHYSRQYDGSKWSAWTQDASESEITQLRDDINLRVQKGELLSQINLTAGNTLIQSNKLYLDASSVVITGTAFIPSAAIASLSADKINTGTLNTDKISLSNGHVRLSSDDDHFYVQTEENAVNNPTTRFNFDGIDFMDSSYGKEVPQYSIGYDTSSADRHLYINAFDHFNSGGTTASQLWYSMVPAISLNNQEINFAAKGNMHMQVVDGGVNIKPTLFFQNNTNNGTYTGFTRLDNSNTVEFNTGDNNGENFHVNSGARFMKYVYFNDYCRAQGWLTYSTLSKKTNIKKLDTSLALDKIRQDDQYLYEYKRNVAKGVYDPQASFIIDDVNDVSQYSVPREFIDQSGKYREPSVELSYLIAAFQEIDKQVQTQKEEIKELKEKLQHE
Physico‐chemical
properties
protein length:1198 AA
molecular weight: 132128,78850 Da
isoelectric point:5,17607
aromaticity:0,07429
hydropathy:-0,56177

Domains

Domains [InterPro]
Coil
Unmapped
131–158
Coil Coil Coil Coil IPR047149
SSF57997
STR
138–393
SSF57997 DC_2025
G3DSA:1.20.5.340
STR
182–299
G3DSA:1.20.5.340 Coil cd19958 IPR030392
DC_2057
STR
294–628
DC_2057 Coil
AYN56740.1
1 1198
Architecture
STR
RBD
STR
RBD
STR 138-628 | RBD 629-761 | STR 762-830 | RBD 831-1198
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Lactobacillus phage LR1
[NCBI] 		2419581 No lineage information
Host Lactobacillus reuteri
[NCBI] 		1598 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYN56740.1 [NCBI]
Genbank nucleotide accession
MH837542 [NCBI]
CDS location
range 32781 -> 36377
strand +
CDS
GTGAGATTAAGAAAGATGGCAACAAACACTGATGGACGTGAAGAAATTAAACCTGTTGCACCAACCGAGCAGACAAAGTGGCGTGATCCCAGCCTGGTTGGCAAATACATGGTTGATCCTAAAACAGGATTGGCCGGTCTTTTTCGATCCCCTGACAATGGTGAGACTTGGGTTCTTACCGATACCGTCTATGGTCACGTTTATAATCAAGACGAGGTTGACAACATTTGGGACAACGGTGCAGCTCATAAAGTGGCAGATGAAATCAAATCTGCTACGGCTGACTTGCCAAATGTCCGTAAGCAAGCTGATGAAGCGGTAAAATTTGCTGAATCGGCTATTGCTGCAAGTAAGGTCAATAGTGATGCGATCGTTGCGCAAAGTTCGGCTGTGGTTGAAGCAAAGTCAGCAATGGATAGTGCTACGGCGGAAATTCAGCAATTAAAAGCTAACGCAGCTAGCGATGTTGCGCAAATAGAATCAACTATTGCTGAGGTACAGGCTGGTGTCAACCAAGCAAAATCTGCCAATAAATCAGCCGTCCAAGCAGTTCAAGCCGAACTTAAATTGACAAGTGACTCGATGGATAAAGTCGAAAAGCGATTAGATGAAGTTGATACTAGCCTTGACACTTATGCTAAAAGTGCTACGGAACAAGGCCATGACATCACTCTGATTAAGCAGAAACAAGGCCAGTTCGAGGCTGATTTTGCTTCTGCACAGGGAAATGTTAATCAGATTCAGGCTGATATCAAAGGTTTACGTCAGAATGTCAAAGACAATCAAGGCAATATTGCCACGTTGCTAACTTCTGCTGATAAGTTGCAAGCATCAATGACAGATGCAGAGAAAAACATATCTAACCTGCTTTTAACAGCAAGCAAGTATGAGCAAACGTTCAAAGACCAAGACGGGCGCTTGAGTAAAGTTGAGCAGACTGCTACTGAACATACGAGTGTATTGGCCGACGCAAAGGGTAATATTGATAAGGTCACGCAGAAAGCAGACAATCTGCAATTATTACTTAGCGATGCTCAAAAGAATATTCAAAATATTCAGCTTGATGCCAAAGGATTGCATGACACGTTAACTGGTCAAAATAATCAATTGGCTAGTCTTAATGTGACACTTAACAACTTAGATAGTAAGTATTCCGGTATTACTGGAGACCTGCAATCTAAACAAACGGCTTTGAGCACTGAACAACAGCAAACTAAGGATATGCTATTGCGTAAAGCTGATAGGTCCGAAGTTGATAGCGTTAAAGGAACTGTTAATCAAGTCAGTGCCGAACAAAAGACAATGGCTGACCAGATTAATCAGAAAGTGTCATCTGTCGAGTATCAGACATTGAAGGATAAAGTTAATGGGATGAAGATTGGTACTCGTAATCTTCTTCACCATTCAGACACATTTGACGGATGGATTAAAGGTTATTCAGTCGCTGTTACAGCGGATAAATATCTTGATGGTAGAATTGCTATTCTTGGAGGCGCTGGTGTAGACGGCGGACAACTTACTACTTTTCTGGATGGTCCATATAACGATGATCTAGTAACATGGGTAGTTTATGCCAGAGCAGAGAATGCTGGAGATAAAATGCATACAGAATTATGGGGAGGCGGAGGTTGTACAGATCAAAGCCTCACTACCAAATGGCAAGCTTATAAATTTTCTGGTCATAGAAATATTGATCACCCTGACTTTTATTTGTGGGGCTGCGTTGGTAACAAGGGAAATATTTATGTAGCTTTACCCTTTGCTGTTGTTGGAAATTATATTGGTACATGGTTAGCTAATCCTACTGATACCATCACCTCTATTAACAAGAATGCAACTGCTATCGATGAAAATAGTAAGCTTATTAGTTTAATGGCAAAGCAGACTGAGGTTGACAATGTAAAAAATACGGCGCAACAAATTAGTTCTCGTCTTGACATCTTAGCTGGTGAAGTTAAATCAAAAGTTGATGAAACTAGGGTTAATAGCATTGTTGACGGTAAGGGCTATGCGACAACCAGCACGGTACAATCATTAGTCGATCAAAAAGCTGGGACATTAAGCGATACTATCACAGAGCTTGACCGAAAGATTGGTGACAACCACTCCGATTCAATCAAACGTATCCAGTCACTTACGGCTTCAATTGACGGCTTGCAGTCAAGAGTTACCAACTATCAAAATGATACATCCTCAAAGTACACGCAACTTTCGAACATGATCCAGTCAAAGGTTAGTGCCAGCGACTTCAACGCTTTGAAAGACAAGGCGACGTGGAAGAGTACCGACAGCATTGACCTCAACACCGCCGTGTTACAGCAGAAGATTTTCGTCAAAGGCGGATCTAATCTGCCACCGGGTAACTATTGGTGGTACGTGCAGGTTGAACCCGGCTATGACAGCCGAATCGTCCAGTACGCCGTGTCTGACCGGGACAACATTCATTACAGCCGCCAGTACGACGGAAGTAAATGGTCTGCATGGACGCAAGATGCTAGTGAGAGTGAAATCACCCAGCTTCGTGATGATATTAATCTGCGAGTTCAAAAGGGCGAACTGCTGTCACAGATTAATTTAACGGCTGGTAATACGTTGATTCAGTCAAATAAGCTATACCTTGATGCTTCATCCGTAGTAATTACTGGAACGGCCTTTATTCCGAGTGCGGCAATTGCTAGTTTGAGTGCCGATAAGATTAATACTGGAACACTTAATACCGACAAGATATCGTTGAGTAACGGACATGTAAGACTATCATCTGATGATGACCATTTTTATGTTCAGACAGAAGAGAATGCGGTTAATAACCCTACAACTCGGTTTAATTTTGATGGTATAGACTTCATGGATAGCTCATATGGTAAAGAAGTTCCTCAATATAGCATTGGGTATGATACTTCTAGTGCTGATCGTCATTTATATATCAATGCTTTTGACCACTTTAACTCGGGTGGGACAACAGCTAGCCAACTATGGTATTCAATGGTACCCGCTATTAGTCTGAATAATCAGGAAATTAACTTTGCTGCTAAAGGTAATATGCATATGCAAGTAGTTGATGGCGGAGTAAATATTAAGCCAACGTTATTTTTCCAAAATAATACTAATAATGGGACTTATACTGGCTTTACCCGTCTTGATAATTCTAATACTGTTGAATTTAATACCGGTGATAACAACGGCGAGAACTTCCATGTTAATTCTGGTGCTCGCTTCATGAAGTATGTTTACTTCAATGATTATTGCCGAGCACAAGGATGGCTCACTTATTCGACCCTATCAAAGAAGACAAATATCAAAAAGCTTGATACTAGTCTGGCGCTAGATAAGATCCGTCAAGATGACCAATACCTTTATGAGTATAAGCGGAATGTAGCTAAGGGTGTTTACGATCCGCAAGCTAGTTTCATCATTGATGATGTGAACGATGTATCACAATACTCAGTTCCACGGGAATTTATTGATCAAAGCGGTAAATATCGTGAGCCGAGTGTTGAGCTGTCATACCTAATCGCCGCCTTTCAAGAAATTGATAAACAAGTGCAAACACAAAAAGAAGAAATCAAAGAATTAAAGGAGAAATTACAACATGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b69f61778c218949e83a6879fa90dcef5dcbb79fc20784262761f35bba033f0
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3626
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50