Protein

View in Explore

Genbank accession

QKE54632.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,68

Evidence RBPdetect2

Probability 0,96

Protein sequence

MANNTTPISQLPAGNSELTGNEVVPAVQSGKTVKFPLSILKGPKGDKGDKGAEGAAGAKGDKGDKGDKGDTGAEGAAGAKGDKGDKGDKGEDGKDGTDGTNIRLLGTKPTIDDLPTTDNQAGDTWFVGGAGYTWNVTEAMWKTIGSFVGENGVSVSIIGVFADASALPPAGDNTNALAMVSSHLYGCDGSSWTDLGDLRGPQGLGLFPKGQLSNESSLPEPSSDNAAWMYLIDGVMYVSDGTEWVNFGSIKGPQGDKGEQGIQGIQGLKGDKGDTGEQGIQGLKGDKGDTGPKGDKGDKGDQGVQGERGLGVQIIDRLDDVSQLPEPADYTNGDTFVIGGHYWTNYQGAWVDLGDMSGPEGKSAYQVWLSDGNEGTVTEFLESLKGHDGIGLQIRGSFGTTADLPVSGMINGDAYIIEKQMHVWDGTQWSIVGQVGPKGDKGDKGDKGEQGSIGQTGPKGDTGEQGIQGIQGVKGDKGDKGDKGDTGAPVFAKGSVANAAALPPASADNIGHYYTTLDTKHSHISNGTAWIDMGDMSGAKGDKGDQGIQGEMGPGITILGKLNATSELPGSAELGQGYLINGDFYGWDGDSFENMGPIQGPKGDTGEKGETGEKGEKGEQGNTGLQGPAGKDGTNGVDGAKGEKGDKGEKGDKGDTGTGIALKGKLASSSALPSSGNTDGDAYIVTVSGESHLMVWQTDAWEDSGVVTGIKGDKGDKGDKGDTGATGAAGAKGDTGAKGDKGDPGRSVTILGKFDNESQLPSVASNGDGYLINGHLWTWVDTAFVDVGVIQGPKGDKGEQGPKGDKGDTGEVGPQGEVGPKGDTGEVGPQGDVGAGVTPKGTVASAADLPAAAADNTGHMYVTLDDKHSHISNGTAWIDFGDFSGAKGDVGPTGAKGDKGDTGSKGDAGASVVAKGSVANAAALPAAAPANAGWYYTTADTKHSYISDGASWIDMGDMSGAKGDTGAKGDTGAKGDMGVGLVPKGTVASASALPAAAVGNTGWIYVASDTMHSHVSSGTAWLDLGSLQGPKGDKGDIGQTGAKGDKGDTGEKGIQGDRGIQGLTGEVGPQGVKGDSVSFKGHVDTDDGLPSADRVVGDTWAVGTILKYWNGASWQELGDFKGDVGPQGPQGEMGAGIRILGKKDTVGDLPASAAAAGDGYMIGTNFYVWDGSAFVNVGPIQGPKGDVGARGLTGAKGEQGDKGNKGDKGDPGTKWLVFAREPGVADGVIGDYFLDTTNQEYYQKTSTTAWSKLGVLGGGNVYDAAHDGKRKVRIDGTWVDLVFDFDRYDLKLVQPTGATLDFALGNGFKLSATTTKALTIKNLPAATRIATIVIVLEGKGGNITFTNPISWSRGEAPTLGDTRTVIALLWDGANLTGQVAMTV

Physico‐chemical properties

protein length:	1383 AA
molecular weight:	140385,24530 Da
isoelectric point:	4,63735
aromaticity:	0,06218
hydropathy:	-0,50860

Domains

Domains [InterPro]

DC_0729
ATT
1–41

DC_0729 IPR050149 DC_1340 IPR008160

IPR008160
STR
42–99

IPR008160 IPR008160 IPR008160 DC_1340 DC_1340 DC_1340

DC_0114
RBD
68–282

DC_0114 DC_1340 IPR008160 IPR008160 DC_0114

DC_0915
ATT
272–433

DC_0915 DC_1340 DC_1340

QKE54632.1

1 1383

Architecture

ATT

STR

RBD

STR

ATT

STR

RBD

ATT 1-41 | STR 42-99 | RBD 100-251 | STR 252-271 | ATT 272-433 | STR 434-1074 | RBD 1075-1383

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0729	ATT	DC_0729	1	41	Novel HMM	DC_0729	N-terminal	Low	Positional only	34 proteins / 34 hits
IPR050149	Unmapped	-	41	835	InterPro	Collagen superfamily	-	-	-	-
IPR008160	STR	DC_0536	42	99	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0114	RBD	DC_0114	68	282	Novel HMM	DC_0114	C-terminal	Low	Positional only	42 proteins / 42 hits
IPR008160	STR	DC_0536	252	308	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0915	ATT	DC_0915	272	433	Novel HMM	DC_0915	N-terminal	Low	Positional only	48 proteins / 48 hits
IPR008160	STR	DC_0536	433	488	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	456	545	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	536	640	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	600	657	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	626	730	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	720	816	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	791	835	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1340	STR	DC_1340	806	897	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	885	973	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
DC_1340	STR	DC_1340	959	1060	Novel HMM	DC_1340	Central	Low	Positional only	192 proteins / 192 hits
IPR008160	STR	DC_0536	1029	1074	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_0114	RBD	DC_0114	1046	1383	Novel HMM	DC_0114	C-terminal	Low	Positional only	42 proteins / 42 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Salmonella phage vB_SalM_SA002 [NCBI]	2739752	Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host	Salmonella enterica subsp. enterica serovar Heidelberg [NCBI]	611	Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Genbank protein accession

QKE54632.1 [NCBI]

Genbank nucleotide accession

MN445183.1 [NCBI]

CDS location

range 268132 -> 272283
strand -

CDS

ATGGCGAACAATACTACTCCAATTAGTCAGTTGCCTGCTGGTAACTCAGAGCTAACTGGCAACGAAGTGGTCCCTGCGGTTCAGTCTGGTAAGACGGTTAAGTTTCCGCTTTCCATTCTGAAAGGCCCGAAAGGCGACAAAGGCGACAAAGGCGCTGAAGGTGCCGCTGGCGCAAAAGGCGATAAGGGCGACAAAGGCGACAAAGGCGACACCGGCGCTGAAGGCGCGGCTGGTGCTAAGGGTGACAAAGGCGATAAGGGCGATAAAGGCGAAGACGGTAAAGACGGCACTGACGGCACCAACATTCGTCTGCTCGGCACTAAACCGACTATCGACGATTTGCCAACCACCGATAACCAGGCTGGTGACACTTGGTTCGTAGGTGGTGCGGGTTACACCTGGAACGTTACCGAAGCGATGTGGAAAACCATCGGTAGCTTCGTAGGTGAGAACGGTGTGTCTGTTAGCATTATCGGTGTCTTTGCTGATGCTTCTGCGCTCCCACCTGCCGGCGACAACACAAACGCCCTGGCGATGGTCAGTTCTCACCTGTACGGTTGCGACGGTTCCTCCTGGACCGACCTGGGTGACCTGCGTGGCCCGCAAGGTCTGGGTCTGTTCCCGAAAGGTCAACTGTCTAACGAGTCCAGCCTGCCTGAACCGTCATCCGATAACGCGGCCTGGATGTACCTGATTGATGGCGTGATGTATGTATCCGACGGCACTGAATGGGTGAACTTCGGGAGCATCAAAGGCCCTCAGGGTGACAAAGGTGAACAGGGTATCCAGGGTATCCAAGGCCTGAAAGGCGATAAAGGGGACACTGGTGAACAGGGTATCCAAGGCCTGAAAGGCGATAAAGGTGATACCGGGCCGAAAGGCGATAAAGGTGATAAAGGCGATCAAGGCGTCCAAGGCGAACGTGGCCTGGGTGTGCAGATCATCGATCGCCTGGACGACGTCTCCCAGCTGCCAGAACCTGCTGATTACACCAACGGCGACACCTTTGTTATTGGCGGCCACTACTGGACTAACTACCAGGGCGCGTGGGTTGATCTCGGTGACATGTCCGGCCCAGAAGGTAAATCCGCTTACCAGGTTTGGCTGTCTGATGGTAACGAAGGCACGGTGACTGAATTCCTCGAGTCCCTGAAAGGTCACGACGGTATCGGTCTGCAAATCCGTGGTTCTTTTGGCACCACAGCTGACCTGCCGGTATCCGGCATGATTAACGGTGATGCGTACATCATCGAGAAACAAATGCACGTGTGGGACGGCACTCAGTGGTCTATCGTTGGTCAGGTGGGTCCTAAAGGCGATAAAGGCGATAAGGGCGATAAAGGGGAACAAGGCTCCATCGGCCAAACCGGTCCTAAGGGTGATACTGGGGAGCAGGGCATTCAGGGTATCCAGGGTGTCAAAGGTGATAAGGGTGATAAAGGCGACAAGGGTGATACCGGCGCGCCTGTATTCGCTAAAGGTTCTGTTGCTAACGCGGCAGCACTCCCACCTGCATCCGCCGATAACATCGGTCACTACTACACCACGCTCGATACCAAGCATTCGCATATTTCTAACGGCACTGCCTGGATCGACATGGGCGATATGTCTGGCGCCAAAGGCGATAAGGGTGATCAGGGTATCCAGGGTGAAATGGGCCCAGGCATTACCATTCTCGGTAAATTGAACGCCACGTCTGAATTACCTGGTTCCGCTGAACTCGGTCAGGGTTACCTGATCAATGGTGATTTCTACGGTTGGGATGGCGACTCTTTCGAAAATATGGGGCCTATCCAGGGACCGAAAGGTGACACTGGTGAGAAAGGTGAAACCGGTGAGAAAGGGGAGAAAGGGGAACAGGGTAATACTGGTCTTCAAGGTCCTGCTGGTAAAGACGGCACTAACGGCGTAGACGGTGCCAAGGGTGAGAAAGGCGACAAGGGTGAGAAAGGCGACAAGGGTGATACCGGTACTGGTATTGCATTGAAAGGCAAACTTGCTTCTTCTTCCGCATTACCGAGCAGCGGTAACACCGATGGCGATGCTTACATCGTTACCGTTAGTGGTGAATCCCACCTGATGGTGTGGCAGACCGACGCCTGGGAAGACTCCGGCGTTGTCACCGGCATTAAAGGTGATAAAGGCGATAAAGGCGACAAGGGTGATACCGGTGCGACTGGTGCTGCTGGCGCCAAAGGTGATACCGGCGCCAAGGGTGACAAAGGTGACCCTGGTCGCTCGGTCACGATCCTGGGTAAATTTGACAACGAGTCGCAGTTGCCGTCAGTTGCCTCTAACGGTGATGGTTACCTGATCAATGGTCATCTCTGGACTTGGGTTGACACCGCCTTTGTTGATGTTGGTGTGATTCAGGGGCCGAAAGGTGATAAGGGTGAGCAGGGTCCGAAAGGCGATAAAGGCGATACCGGTGAGGTTGGTCCTCAGGGTGAGGTTGGTCCGAAAGGTGACACCGGTGAAGTTGGTCCTCAGGGTGATGTGGGGGCTGGGGTGACACCTAAGGGTACCGTTGCTTCAGCTGCTGATTTACCTGCGGCAGCAGCAGACAACACCGGTCACATGTATGTGACGTTAGATGATAAGCACTCGCATATCTCTAACGGTACTGCCTGGATTGATTTCGGTGATTTTTCTGGTGCGAAGGGCGACGTTGGGCCGACAGGCGCCAAGGGTGATAAAGGCGATACCGGCAGCAAAGGTGACGCCGGCGCGTCAGTGGTAGCTAAAGGTTCTGTTGCTAATGCGGCAGCGCTGCCTGCGGCCGCTCCGGCCAACGCCGGCTGGTACTACACCACAGCTGACACCAAGCATTCGTATATCTCCGACGGTGCATCTTGGATTGACATGGGTGATATGTCAGGAGCCAAGGGTGACACTGGTGCGAAGGGCGATACTGGTGCGAAGGGTGATATGGGTGTGGGTCTGGTGCCGAAAGGCACGGTAGCTTCTGCATCTGCACTACCTGCGGCTGCTGTTGGTAACACCGGTTGGATCTACGTCGCGTCTGACACCATGCACTCCCATGTCTCCAGCGGAACCGCATGGCTGGATCTGGGTAGCCTGCAAGGTCCTAAAGGCGATAAGGGGGATATTGGTCAAACTGGTGCCAAGGGTGACAAAGGTGATACCGGTGAAAAAGGTATCCAGGGTGATCGGGGTATCCAGGGTCTGACTGGTGAAGTTGGTCCTCAGGGTGTCAAAGGTGATAGTGTTTCCTTCAAAGGTCACGTTGATACCGATGACGGTCTGCCAAGCGCTGATCGAGTAGTGGGCGACACCTGGGCGGTGGGTACCATCCTGAAATACTGGAATGGCGCCTCCTGGCAAGAACTGGGTGACTTCAAGGGCGATGTTGGTCCTCAGGGTCCTCAGGGTGAGATGGGTGCAGGTATCAGGATCCTCGGTAAGAAAGATACCGTGGGTGATCTGCCTGCTTCTGCCGCTGCCGCTGGTGACGGGTACATGATCGGCACCAACTTCTACGTGTGGGATGGTTCCGCATTCGTGAACGTTGGCCCTATCCAGGGACCGAAAGGTGACGTGGGCGCGCGTGGTCTGACCGGCGCTAAAGGTGAGCAGGGTGACAAAGGCAACAAAGGTGACAAGGGCGACCCTGGCACCAAGTGGCTCGTCTTCGCTCGTGAACCTGGCGTAGCCGATGGGGTTATTGGTGACTACTTCTTGGATACCACCAACCAGGAATACTACCAGAAGACCTCTACGACCGCATGGTCTAAACTCGGTGTGCTGGGCGGCGGTAACGTTTACGATGCTGCTCACGACGGGAAACGTAAAGTTCGTATCGACGGTACCTGGGTTGATCTGGTATTCGACTTCGATCGCTACGATCTGAAGCTGGTGCAACCTACTGGCGCCACGTTGGATTTCGCGCTGGGTAACGGCTTTAAACTGTCCGCAACCACCACCAAAGCGCTGACCATTAAGAACCTGCCGGCGGCAACACGTATCGCGACCATCGTGATCGTGCTGGAAGGTAAAGGCGGTAACATTACCTTTACTAACCCCATCAGCTGGTCTCGTGGTGAAGCGCCTACGCTGGGCGATACCCGTACGGTTATCGCGCTGCTGTGGGATGGTGCTAACCTGACTGGTCAGGTCGCCATGACTGTCTAA

Genome Context

Tertiary structure

PDB ID

4f02739dd63520110969126bf5186bd4c4d09783e8c211436af7b0c6acfc7878

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,6300

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence