Protein

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Genbank accession
UFK26334.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MAYTSKLKTWGATANERAEFPDGYRYTKENPPVTHYDNFLVHNLIEDVQHLIDLTNLIDPDNDGQVADAETIQGKSPEQLGGFKFIQSDNPTENTQGTTWFKNSNHLLFVSDGSQYDVFPEIGYQEYDSLTHTDLDVLHEKVPRTKLTKDGRIMLINEQTVADFEETYEANHEMWSWTNGTSFLSAQSGTVLSGTQSLQIQANGERATPHLSREAPIIQDLEVAVQVESDTANINDFVGIEVFNGTTRILRIQYNDGDGNVELFTGSGTTELMASWNVGTTHAYEFDWDFGNDQYDLYIDGVLDGTYSLESAASGWDEFRIDNNAANSGNTRNVYVDDIHTGAREYGEAVVKFPTPDERIRDWDLVRYTKTLAGESVIIDVEDENGNVLIPDVDSNGDLSAAVDGSVNPQFRVRISREDMANNPSFDAVFRRWTMRPGDSGISNEEKEEWKAMDMRARYRHTRLARRQ
Physico‐chemical
properties
protein length:468 AA
molecular weight: 52824,00520 Da
isoelectric point:4,45762
aromaticity:0,09829
hydropathy:-0,66325

Domains

Domains [InterPro]
DC_0289
ATT
1–185
DC_0289 IPR013320 DC_0290
IPR013320
STR
192–393
IPR013320
UFK26334.1
1 468
Architecture
ATT
STR
RBD
ATT 1-185 | STR 186-393 | RBD 394-468
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Hardygib1 virus
[NCBI] 		2894774 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Haloferax gibbonsii
[NCBI] 		35746 cellular organisms > Archaea > Methanobacteriati > Methanobacteriota > Stenosarchaea group > Halobacteria

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UFK26334.1 [NCBI]
Genbank nucleotide accession
OK649958.1 [NCBI]
CDS location
range 50720 -> 52126
strand -
CDS
ATGGCGTACACTTCTAAGCTAAAGACGTGGGGAGCTACCGCTAACGAGCGGGCTGAGTTCCCCGATGGGTACAGGTACACGAAGGAAAACCCGCCCGTCACCCACTACGATAACTTCCTCGTTCACAATCTCATCGAGGATGTTCAACACCTCATCGACCTCACGAATCTCATCGACCCCGACAACGATGGGCAGGTCGCTGACGCCGAGACGATTCAGGGGAAGTCCCCGGAACAGCTTGGTGGGTTCAAGTTCATTCAGTCGGACAACCCGACCGAGAACACTCAGGGGACGACGTGGTTCAAGAACAGCAACCACCTTCTGTTCGTCTCTGACGGCTCTCAGTATGACGTATTCCCCGAAATCGGCTATCAGGAATACGACTCGCTGACCCACACCGACCTCGATGTTCTCCACGAGAAGGTTCCACGAACGAAGCTCACGAAGGACGGTCGGATTATGCTCATCAACGAGCAGACCGTCGCTGACTTCGAGGAAACATACGAAGCGAACCACGAGATGTGGTCTTGGACGAACGGAACATCTTTCCTCTCCGCTCAGTCGGGAACAGTTCTCTCTGGAACACAGTCACTTCAAATTCAGGCAAACGGAGAGCGTGCGACTCCCCACCTCTCTCGGGAAGCTCCGATTATCCAAGACCTCGAAGTGGCTGTTCAGGTGGAGTCTGACACCGCGAACATCAACGATTTCGTTGGTATCGAGGTCTTCAACGGGACGACTCGGATTCTCCGTATCCAGTATAACGACGGTGACGGAAACGTTGAGCTGTTTACTGGTAGCGGTACGACCGAGTTGATGGCGAGCTGGAACGTGGGGACGACCCACGCTTACGAGTTCGATTGGGACTTCGGCAACGACCAGTACGACCTCTACATCGACGGGGTTCTCGATGGAACCTACTCTTTAGAGAGTGCGGCTTCTGGATGGGACGAGTTCCGAATTGACAACAACGCGGCAAACTCCGGTAACACCCGGAACGTCTACGTTGACGATATTCACACGGGCGCTCGGGAGTACGGCGAAGCGGTCGTGAAGTTCCCGACCCCGGACGAGCGGATTCGAGATTGGGACTTGGTTCGGTACACCAAGACCCTCGCCGGAGAGTCCGTAATCATCGACGTGGAGGACGAGAACGGGAATGTCCTCATTCCTGACGTGGACAGCAACGGCGACCTCAGCGCGGCAGTTGATGGGTCGGTGAACCCACAGTTCCGCGTTCGGATTAGCCGGGAGGATATGGCTAACAATCCCTCCTTCGATGCGGTGTTCCGCAGGTGGACGATGCGGCCCGGAGATAGCGGTATCTCGAACGAGGAAAAAGAGGAGTGGAAGGCGATGGATATGAGGGCGCGATACCGCCACACGCGGCTCGCTCGACGGCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ad1144d044a6dbf88f191663a33523161d769871f8dacac25e1ebf79946fc027
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7338
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Halovirus HF2 Intergenic Repeat Sequences Carry Promoters Russ,B., Pfeiffer,F. and Dyall-Smith,M. 2021 34960657 GenBank