Protein

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Genbank accession
WPK33513.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAISSGWVGSSAVSETGQRWMSAAMQAVRLGRPAYMSAMVGRSKEIHYSIGASNSYNKDTLINWMKAQGSTPVVITITGDIVSQSTGVPCLDFPSSLTNEYVTLIINSGVTVYGRGGNGGSNAAGAAGGNAINNAIGTRLRITNNGAIAGGGGGGGGGNRGRLVFGGGGGRPFGAAGSSSNMGSGATAGSISAPGKGSVGSGSLSAYTGGAGGNVGAAGGRCNTQGNGTEYNGGAAGKAVTGNAPRWDKVGTIYGARV
Physico‐chemical
properties
protein length:258 AA
molecular weight: 25050,43840 Da
isoelectric point:10,12136
aromaticity:0,05814
hydropathy:-0,11008

Domains

Domains [InterPro]
IPR048291
ATT
1–40
IPR048291 IPR007932
DC_1679
STR
4–155
DC_1679
WPK33513.1
1 258
Architecture
ATT
STR
RBD
ATT 1-40 | STR 41-155 | RBD 156-258
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV108
[NCBI] 		3077253 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK33513.1 [NCBI]
Genbank nucleotide accession
OR352938.1 [NCBI]
CDS location
range 123769 -> 124545
strand -
CDS
ATGGCAATATCTTCTGGATGGGTAGGATCATCTGCTGTGTCCGAGACTGGTCAACGGTGGATGAGCGCCGCAATGCAAGCTGTACGCTTAGGTCGTCCGGCGTATATGTCGGCAATGGTCGGACGCTCTAAAGAGATTCATTATAGCATTGGTGCTAGTAACTCTTACAATAAAGACACTCTTATTAACTGGATGAAAGCACAAGGATCTACTCCTGTAGTAATTACTATCACGGGTGATATTGTTTCCCAATCTACTGGCGTTCCTTGTCTTGACTTCCCTAGCTCGTTAACAAACGAATATGTAACATTGATCATTAACTCCGGTGTGACTGTCTACGGACGTGGGGGTAATGGTGGTAGTAACGCTGCTGGCGCTGCTGGTGGAAACGCAATCAATAACGCTATCGGTACACGTCTACGAATTACAAATAACGGTGCTATCGCTGGTGGCGGCGGTGGCGGCGGTGGAGGTAACAGGGGTCGACTAGTATTTGGTGGTGGCGGTGGTCGCCCATTCGGTGCTGCCGGGTCTTCCTCTAATATGGGTTCTGGTGCAACCGCTGGCTCCATTTCCGCTCCGGGTAAAGGATCTGTTGGTTCGGGGTCTCTTAGTGCATATACAGGCGGTGCGGGCGGTAACGTTGGTGCTGCTGGAGGAAGATGTAATACTCAGGGGAACGGTACAGAGTATAATGGCGGAGCGGCTGGTAAGGCTGTTACTGGCAATGCCCCTCGCTGGGATAAAGTAGGCACGATCTACGGTGCTCGCGTGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
847de2d83a798698157d56ccc2ab491a23c008a4f4364e1ae0a1203231b7ca44
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8975
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank