Protein

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Genbank accession
XLZ15558.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MSGIAMMLMAVSAGASGSSDFVFNQTISADTQHYNLRAAAVTAGWDQVKPLKATITINSGIVVSANSTSLYAFDTGTTFPAGTTLALINNGVIVGMGGAGAPTYPRQAGGSGGPALRVQHAITITNNGTIAGGGGGGGSGAVYDSESDGELYGGGQGGGGRTGRTNSAGCAAYSLDSYPGATYSGGSAASASGAGTYSAAGAAGSGGTTGDGFGPGGSGGAGGGWGSAGGAGVNSTAGGSGYEVLVAAATSGGGAGSAVSGNSNITWAATGTRLGAIA
Physico‐chemical
properties
protein length:278 AA
molecular weight: 25764,58860 Da
isoelectric point:5,09501
aromaticity:0,06475
hydropathy:0,08489

Domains

Domains [InterPro]
IPR007932
RBD
24–277
IPR007932
XLZ15558.1
1 278
Architecture
RBD
RBD 24-277 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Limnohabitans phage YIMV22061
[NCBI] 		3390366 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Limnohabitans sp. YIMB22184
[NCBI] 		3374104 Pseudomonadota > Betaproteobacteria > Burkholderiales > Comamonadaceae > Limnohabitans >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XLZ15558.1 [NCBI]
Genbank nucleotide accession
PQ492660.1 [NCBI]
CDS location
range 18925 -> 19761
strand -
CDS
ATGAGCGGAATCGCCATGATGCTTATGGCGGTGTCGGCAGGGGCCTCGGGCTCCTCCGACTTCGTGTTCAACCAGACCATCTCCGCCGACACCCAGCACTACAACCTACGGGCCGCTGCGGTTACCGCTGGCTGGGATCAAGTCAAGCCCCTGAAGGCGACCATCACGATCAACTCCGGGATCGTGGTCAGTGCGAACTCCACTTCGCTGTACGCCTTCGACACCGGCACGACCTTCCCGGCTGGCACCACGCTGGCGCTCATCAACAACGGCGTCATCGTGGGTATGGGCGGCGCGGGTGCGCCCACGTATCCCCGCCAGGCTGGTGGCAGCGGTGGCCCTGCCCTCCGCGTCCAACATGCAATCACCATCACCAACAACGGCACCATCGCGGGCGGTGGCGGTGGTGGCGGCTCGGGGGCCGTCTACGACTCCGAGAGTGACGGCGAACTCTACGGTGGCGGCCAAGGGGGTGGCGGGCGCACAGGGCGCACCAACTCCGCAGGGTGCGCGGCTTACAGCTTGGACAGCTACCCAGGTGCTACGTACTCTGGAGGCTCCGCCGCGAGCGCCAGCGGTGCAGGCACGTACTCGGCAGCGGGTGCGGCTGGCTCCGGTGGCACCACGGGTGACGGCTTCGGGCCGGGTGGCTCGGGAGGCGCTGGCGGTGGCTGGGGCAGTGCGGGTGGTGCGGGTGTCAACTCCACCGCTGGCGGCTCCGGCTATGAAGTCCTGGTGGCCGCTGCTACCTCTGGCGGTGGTGCGGGCTCTGCGGTGTCGGGCAACTCCAACATCACCTGGGCCGCGACTGGCACCCGCTTGGGAGCCATCGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0ae294a0079708cb6627f62626015fe0717be57b55df83db931ef277692cc045
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7810
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50