Protein

View in Explore
Genbank accession
WAX24153.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MAKAGGTYPDILQGVSQKPAHRRRPGQTHEQINVLSDPVNGLVRRRGTRFAASQAVVTSAELRNMDVFDFTQEGKEYALLYRRDASTLGSESFAFLYNKTDEAFIPLVYENSTWVNTLVSGGASSLAAIGSYVYIAGNTTIPTATSTNVWQEQTNIQRLAAWVRTGKYNTTYTVNLTRTDNTVLTVTFKTVTASYPGTLDTSDIPFYLPGGTEPDPAYQKYVNDRVNEYNSAVNEWIVTSAEQTRPEYIAEKLSDALVDAGVSATYIKGGIIIDDDQFKDITVDDEGDGTTFYAAGQEITDATYAVKFHWHGKVIRVRPSGAGADESYYLRAELENGETSGYGSVDWYEAPGVECTIDNLVSQLYIYNGVGYIARNGAGLTSLAPGSGEHPAYGARVAGDGLTSPIPWFIDKPITMLSVFQDRLVIGAQNYVNASRSADYLNFWRGSAVTIEDSDPIEIFAHGSEGDVLRHATLYNGNLVIFGDRQQYGISGDSVFSPKNPLIKAFSANKDSVDAKAQTSGNYIFYAQYGSEGTSLHQMRVGALNGQQTVTDEMSNELDSWLSGTPLQITPLTAPNLVMFRTREHPQDFYLYRYEDNKNNGQRIVDAWSKFQYHPALGEIIGVSSYKKNGLVFTARGSLVACDVFDPKGEPDSHACLDSWASFGTPTGVQTASASIAVNSTSPYFLLGCPYAQSSDFLSQFDDLDAGALEYGVVSEALVIPTNPFPRDQNGQAVLDGRMSLNKVTVDVENTAGMIATVATRNNAVTTTDFEGRILGDSDNLIARQPVYRGQLNISVGREVRECTYEIRSKAWLPLRVTGLSWTGQTFNNVRRVS
Physico‐chemical
properties
protein length:834 AA
molecular weight: 91281,14700 Da
isoelectric point:4,91057
aromaticity:0,10432
hydropathy:-0,31463

Domains

Domains [InterPro]
IPR058003
TTP
1–632
IPR058003 IPR058003
DC_0058
STR
1–834
DC_0058
WAX24153.1
1 834
Architecture
STR
STR 1-834
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WAX24153.1
1 834
Domain Start End Length (AA) Confidence
N-terminal 1 187 187 0,8674
Central domain 188 387 201 0,3382
C-terminal 388 834 446 0,3147
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-187
Central
188-387
C-terminal
388-834

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage GF1
[NCBI] 		3003371 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Xanthomonas perforans
[NCBI] 		442694 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WAX24153.1 [NCBI]
Genbank nucleotide accession
OP583593 [NCBI]
CDS location
range 28578 -> 31082
strand +
CDS
ATGGCGAAGGCGGGAGGTACATACCCCGACATCCTACAGGGTGTCAGTCAGAAACCGGCGCATCGTCGTCGGCCGGGTCAGACGCACGAGCAGATCAACGTGCTGTCCGATCCGGTGAACGGCCTCGTGCGCCGTCGTGGTACGCGGTTCGCTGCTTCCCAAGCCGTTGTCACCTCGGCCGAGCTGCGCAACATGGACGTGTTCGACTTCACGCAGGAGGGCAAGGAGTACGCGCTGCTGTACCGGCGCGACGCCTCTACCCTGGGCAGTGAGTCCTTCGCGTTCCTCTACAACAAGACGGACGAGGCGTTCATCCCACTGGTGTACGAGAACAGCACGTGGGTCAACACACTGGTCAGCGGCGGCGCATCGTCGCTCGCGGCCATCGGCAGCTACGTCTATATCGCGGGTAACACCACGATCCCCACGGCCACCAGCACGAACGTGTGGCAGGAGCAGACGAACATCCAGCGCCTCGCAGCGTGGGTGCGCACCGGCAAGTACAACACCACGTACACGGTGAACCTGACGCGCACGGACAACACCGTGCTTACGGTGACGTTCAAGACGGTGACCGCATCGTACCCCGGAACGCTCGACACCAGCGACATCCCGTTCTACCTTCCCGGTGGTACGGAGCCGGACCCGGCGTACCAGAAGTACGTCAACGACCGAGTGAACGAGTACAACTCTGCGGTCAACGAGTGGATCGTGACGAGCGCCGAGCAGACGCGCCCGGAGTACATCGCCGAGAAGTTGTCCGACGCGCTGGTGGATGCAGGCGTGTCCGCCACATACATCAAGGGCGGGATCATCATTGACGACGACCAGTTCAAGGACATCACTGTTGACGACGAGGGCGACGGCACCACCTTCTACGCCGCAGGGCAGGAGATTACCGATGCGACCTACGCCGTCAAGTTCCACTGGCACGGCAAGGTTATCCGCGTGCGCCCGAGCGGTGCAGGCGCGGACGAGTCGTACTACTTGCGTGCTGAGTTGGAGAACGGCGAGACTTCCGGCTACGGGTCGGTGGATTGGTACGAAGCGCCCGGCGTGGAGTGCACCATCGACAACCTCGTGTCGCAGCTCTACATCTACAACGGTGTGGGCTACATCGCACGCAACGGTGCGGGCCTCACGTCTCTGGCTCCGGGCAGCGGCGAGCACCCGGCTTACGGTGCGCGGGTGGCAGGCGACGGTCTGACCTCGCCGATCCCGTGGTTCATCGACAAGCCGATCACGATGCTGTCCGTCTTCCAAGACCGGCTGGTCATTGGTGCGCAGAACTACGTCAACGCCTCGCGCTCGGCGGACTACCTGAACTTCTGGCGCGGCTCGGCCGTCACCATCGAAGACAGCGACCCCATCGAAATCTTCGCGCACGGTAGCGAGGGCGATGTGCTGCGGCATGCGACGCTCTACAACGGCAACCTCGTGATCTTCGGTGACCGTCAGCAGTACGGCATCAGCGGCGACTCGGTGTTCAGTCCGAAGAACCCGCTGATTAAGGCGTTCAGTGCCAACAAGGATTCGGTGGACGCGAAGGCGCAGACCTCGGGCAACTACATCTTCTATGCGCAGTACGGCAGCGAAGGCACGAGCCTGCACCAGATGCGCGTGGGCGCGCTCAACGGTCAGCAGACGGTGACGGACGAAATGTCCAACGAGCTGGACTCGTGGCTGTCGGGCACCCCGTTGCAGATCACCCCGCTCACCGCACCGAACCTCGTCATGTTCCGCACGCGAGAGCACCCGCAGGACTTCTACCTGTACCGGTACGAGGACAACAAGAACAACGGGCAGCGCATCGTGGACGCATGGTCGAAGTTCCAGTACCACCCAGCGCTGGGCGAAATCATCGGCGTGAGCAGCTACAAGAAGAACGGCCTCGTGTTCACTGCACGCGGGTCGCTGGTGGCGTGCGACGTGTTCGACCCGAAGGGCGAGCCGGACTCGCATGCGTGCCTCGACAGCTGGGCGAGTTTTGGTACACCTACGGGCGTACAGACCGCGAGCGCGAGCATCGCCGTCAATAGCACTAGCCCGTACTTTCTGCTGGGCTGTCCCTACGCTCAGTCGTCTGACTTCCTTAGCCAGTTCGATGACCTCGATGCTGGTGCGTTGGAATACGGCGTGGTGTCCGAAGCTCTGGTGATCCCTACCAATCCGTTCCCTCGGGACCAGAACGGTCAGGCCGTACTCGACGGGCGCATGTCGCTCAACAAGGTGACGGTGGACGTGGAGAACACGGCAGGCATGATCGCCACGGTGGCAACCCGCAACAACGCGGTGACCACCACGGACTTCGAGGGCCGCATCCTCGGCGACTCCGACAACCTGATCGCGCGGCAACCGGTGTACCGGGGGCAGCTCAACATCAGCGTCGGGCGCGAAGTGCGCGAGTGCACCTACGAGATTCGCAGCAAGGCTTGGCTCCCGCTCCGGGTGACTGGCCTGAGCTGGACGGGTCAGACCTTTAATAACGTGAGACGCGTATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfd1e8d9857c47cbde70814ddc452724c83525f027545eda4dc0179224186f2a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2902
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50