Protein

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Genbank accession
YP_004323874.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence RBPdetect
Probability 0,64
Protein sequence
MSKLTVSELNGISTSLNQVDIPAGHQLKIDGNLAFDHTGAHTLPSGNTAARPASPPMGAMRFNTDISSFEIYIGSWEIVGGSGNAASALGSFGNPAQNGIDLKESGAADGYYWIRPIGHTNPRYCYVDNTNYDGGWVLVKTIGSNTTNHWDTFESSNLYSATIDGQAASYVPYSGTGYSTTDGRRHDDNFIRDLGSFANGGGETINIRIAQNGAAPLGGPYDTYAGGTSSNWRYASFIRMNNGIHYFSSLNTGGDGRQGDRREGTFSVSHVYPYNWERPGGHDHIRVYSDAYKVFDYHSNPSNIQTSRYGVNRVLYGYTGSNSGRGIYGGSASFTGSNNLNPGYFFIR
Physico‐chemical
properties
protein length:348 AA
molecular weight: 37593,35530 Da
isoelectric point:6,24066
aromaticity:0,12644
hydropathy:-0,54943

Domains

Domains [InterPro]
DC_0522
ATT
1–122
DC_0522 DC_2300
IPR036056
STR
96–182
IPR036056
NF040941
Unmapped
103–139
NF040941
YP_004323874.1
1 348
Architecture
ATT
STR
RBD
ATT 1-122 | STR 123-182 | RBD 183-348
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Syn19
[NCBI] 		445684 Uroviricota > Caudoviricetes > Pantevenvirales > Pontusvirus > Pontusvirus syn19
Host Synechococcus sp. WH 8109
[NCBI] 		166314 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_004323874.1 [NCBI]
Genbank nucleotide accession
NC_015286 [NCBI]
CDS location
range 33214 -> 34260
strand +
CDS
ATGAGTAAACTAACTGTATCGGAATTAAATGGGATATCAACATCCCTAAATCAAGTTGATATCCCAGCAGGACATCAACTAAAAATTGATGGTAACTTAGCATTTGATCATACTGGAGCACATACACTCCCATCAGGAAATACAGCAGCAAGACCTGCATCTCCTCCTATGGGAGCAATGCGCTTCAATACAGATATTAGTTCATTTGAAATTTATATTGGTAGTTGGGAAATTGTTGGTGGTAGTGGAAATGCTGCAAGCGCATTAGGAAGTTTTGGTAACCCTGCTCAAAATGGTATTGATCTAAAAGAAAGTGGAGCAGCAGACGGATATTATTGGATTAGACCTATTGGACACACTAATCCTAGATATTGTTATGTCGATAATACAAACTATGATGGTGGTTGGGTTTTAGTAAAGACAATCGGATCTAATACTACAAATCATTGGGATACATTTGAATCTAGTAATTTATATTCTGCCACTATTGATGGTCAGGCAGCAAGTTATGTTCCATATTCTGGCACTGGATATAGTACTACCGATGGTCGTCGTCATGATGATAATTTCATTAGAGATTTAGGATCATTTGCTAATGGTGGTGGTGAAACTATTAACATAAGAATTGCACAAAATGGCGCTGCACCTCTTGGTGGTCCATATGATACATATGCTGGTGGCACCAGTTCTAACTGGCGTTATGCATCGTTTATTCGTATGAATAACGGTATTCATTATTTCAGTTCATTAAATACTGGTGGAGATGGTCGCCAAGGTGATCGTCGTGAAGGCACATTTAGTGTCTCCCATGTTTATCCCTATAACTGGGAAAGACCTGGTGGTCATGATCATATTAGAGTGTATAGTGATGCCTATAAAGTATTTGATTATCACTCAAATCCATCAAATATTCAAACATCTCGTTATGGTGTAAATAGAGTCCTCTATGGTTATACTGGTTCCAACTCTGGTCGTGGTATCTATGGCGGGTCTGCATCATTTACAGGCAGCAACAATTTAAACCCAGGTTATTTCTTCATACGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
7064a7719d0dc9c4a240143e9db8a8af6b0f42d45ed8e6dd3a4e043f1a53fa15
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5315
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage Syn19 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C., Galagan,J. and Birren,B. 2011-09-23 — GenBank