Protein

View in Explore

Genbank accession

YP_009820775.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence UniProt/TrEMBL

Probability 1,00

Evidence RBPdetect

Probability 0,88

Evidence RBPdetect2

Probability 0,96

Protein sequence

MSTAYITVVTDKGAERITAALLPDGEKLKITHFAVGDGNGSIPTPTASQTALVHEVYRGEVSNIHADGDSTTRIIVEGIIPAGQGGFWVREIGLYDDQGVLIAVCSAPERYKPTPAEGATSVLNCQVHVVVSNTSAIQLKVLDNAFLPDATTATRGLTILSNETDSDDETKSATPKAVNAVRKQLPVVATDIRDRTSERVALPGMFGYGAILTDVKNFSGAAGVTEFLTWVKAATPGIYQVSQSAGNNNIIPGVVFSGLIEIKYIETSRNSSGPQYEEKGIFFFGVNGDFWYNRYHNASGGSLIGWENLKVDVDALKRLIALKADLNSPVFTGIPAAPTAAENDSSRQIANTEFVMRAIASLIDSSPEALNTLNELAQALGNDPNFATTVTNALAGKQPLNALLTAWSNLTTDANKLPYFTGRNQIGLTNVTSTGLNLLSKGSVDAVLLYLGLTETIKAAKTALQAGNNGSDIVDKVAFAKTIGLSPETYLKFNGAMATDANLNTFGPVEASVGIWSKPITTNADVAHNFPEANAAGYIEVLPTGQFGGTQRYTVRTGNIYVRSLTASWNGQDGPWGEWLKVGNAAATAAKLATARTIGGVSFDGSANIDLPGVNKAGTQNTSGNAATATKLQTARRIGGVAFDGTADIALPGVNATGNQNTTGNAATATKLKTAVTIGGVSFDGSVSISLPGVNAAGNQDTSGNAGSATKLQTARKIGGVAFDGTTDIALPGVNAAGNQNTTGNAATATKLQTTITIGGVSFDGSASINLPGVNAAGNQSTSGNAGSATKLQTARTIGGVSFDGTANIDLPGVNKAGNQSTSGNAATATKLQTARRINGVAFDGTTDISFSINVLASKGRVTALANATQGSNTGIQMYEAYNNGYPTAYGNIIHLKGATAVGEGEILIGWSGTSGAHAPAYLRSRRDAADSNWSEWAQIYTSKDSIPGVNATGNQNTTGNAASATKLQTARTIGGVSFDGTANISLPGVNTTGNQSTTGNAATATKLQTARTIGGVAFDGTANISLPGVNAAGNQDTTGNAATATKLKTARTIGGVSFDGSANINLPGVNVAGNQNTSGNAATATKLQTARTINGKPFDGTANITLAAKDLGLADSSGYVGRLLNMRVFTSSGTYTPTQGTKRIRVTITGGGGGGGGCQAYSNSETFFGAGGGAGGTVISVITVTAASYSVIIGSGGSGGSGATSGNGGGDSKFASLLTAPGGQGAGKTTVTNTGGGYGGAPATGDIRIPGGDGSDGQAGTIAVGGCGGASYWGGGGRAGVGTAHNGLAPGSGGGGAYDNSYSGTAKPGGRGANGICIIEEFM

Physico‐chemical properties

protein length:	1324 AA
molecular weight:	133449,07490 Da
isoelectric point:	7,11592
aromaticity:	0,06042
hydropathy:	-0,11737

Domains

Domains [InterPro]

IPR022225
ATT
1–141

IPR022225 IPR005068 DC_0032 DC_1592 DC_2005 IPR049304

IPR051934
Unmapped
1–612

IPR051934 DC_1592 DC_0654

DC_1371
STR
1–450

DC_1371 cd19958 DC_1592

YP_009820775.1

1 1324

Architecture

ATT

STR

ATT

STR

ATT 1-141 | STR 142-415 | ATT 416-611 | STR 612-1324

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
IPR022225	ATT	DC_0271	1	141	InterPro cluster	Phage tail fibre protein, N-terminal domain	Central	Medium	Text match	271 proteins / 271 hits
IPR051934	Unmapped	-	1	612	InterPro	Bacteriophage Tail Fiber Structural Protein	-	-	-	-
DC_1371	STR	DC_1371	1	450	Novel HMM	DC_1371	Central	Low	Positional only	130 proteins / 130 hits
IPR005068	STR	DC_0738	151	182	InterPro cluster	Bacteriophage lambda, Tail fiber protein, repeat-2	Central	High	Text match	217 proteins / 347 hits
DC_0032	ATT	DC_0032	416	611	Novel HMM	DC_0032	N-terminal	Low	Positional only	139 proteins / 139 hits
cd19958	STR	DC_0464	494	582	InterPro cluster	cd19958	Central	Low	Positional only	1183 proteins / 1674 hits
DC_1592	STR	DC_1592	610	655	Novel HMM	DC_1592	Central	Low	Positional only	38 proteins / 38 hits
DC_1592	STR	DC_1592	650	697	Novel HMM	DC_1592	Central	Low	Positional only	38 proteins / 38 hits
DC_1592	STR	DC_1592	688	736	Novel HMM	DC_1592	Central	Low	Positional only	38 proteins / 38 hits
DC_2005	STR	DC_2005	733	960	Novel HMM	DC_2005	Central	Low	Positional only	76 proteins / 76 hits
DC_0654	STR	DC_0654	915	1324	Novel HMM	DC_0654	Central	Low	Positional only	47 proteins / 47 hits
IPR049304	STR	DC_0631	1132	1321	InterPro cluster	Glycine-rich domain	C-terminal	Low	Positional only	225 proteins / 228 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Escherichia phage vB_EcoM_Goslar [NCBI]	2502409	Uroviricota > Caudoviricetes > Chimalliviridae > Goslarvirus goslar >
Host	Escherichia coli [NCBI]	562	cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Genbank protein accession

YP_009820775.1 [NCBI]

Genbank nucleotide accession

NC_048170 [NCBI]

CDS location

range 98887 -> 102861
strand -

CDS

ATGAGTACAGCATATATAACGGTAGTTACCGATAAAGGAGCAGAACGTATCACCGCTGCGTTACTTCCCGACGGTGAGAAACTAAAAATCACACACTTTGCCGTTGGTGATGGTAACGGCTCGATCCCAACCCCGACCGCCAGCCAAACAGCGCTTGTTCACGAAGTTTATCGTGGGGAAGTTTCTAATATCCATGCGGATGGTGATAGCACAACCAGGATTATCGTTGAGGGTATTATTCCCGCTGGTCAAGGTGGGTTCTGGGTACGTGAGATCGGTCTGTATGATGACCAAGGTGTTCTGATTGCCGTCTGCAGTGCGCCAGAAAGATATAAGCCTACGCCTGCCGAAGGCGCAACCAGCGTTCTTAACTGTCAGGTGCATGTCGTTGTTAGTAATACGAGTGCAATACAGCTTAAGGTGTTGGATAACGCATTTCTTCCTGATGCAACTACTGCTACACGCGGTTTAACTATTCTAAGTAATGAAACCGATAGCGACGACGAGACAAAATCGGCCACGCCTAAAGCGGTTAATGCTGTTCGTAAACAATTGCCCGTTGTTGCGACAGATATTCGTGACCGTACCAGCGAACGAGTGGCTCTACCCGGTATGTTCGGTTATGGGGCGATACTTACCGACGTTAAGAATTTTAGCGGTGCCGCTGGAGTAACAGAATTCTTAACATGGGTTAAAGCCGCAACCCCGGGGATTTACCAGGTATCACAGTCAGCTGGAAACAACAATATAATCCCAGGAGTGGTGTTTAGCGGTCTTATTGAAATCAAATATATCGAAACATCACGAAATAGTTCTGGCCCACAATACGAAGAGAAAGGTATATTCTTTTTTGGCGTTAACGGCGACTTCTGGTACAACCGTTATCATAACGCCAGTGGTGGTTCTCTCATCGGATGGGAAAACCTGAAAGTCGATGTCGACGCACTTAAACGTCTCATCGCTCTCAAGGCAGATCTTAATAGCCCTGTGTTCACCGGTATCCCGGCAGCGCCTACGGCTGCAGAGAACGATAGCAGTCGACAGATTGCCAACACGGAATTTGTGATGCGTGCTATCGCATCGCTGATCGACTCGTCTCCAGAAGCGCTAAATACGCTTAATGAGCTGGCTCAAGCTTTAGGGAACGATCCTAATTTCGCAACGACAGTAACCAATGCGTTGGCGGGTAAACAACCGTTGAACGCGTTGCTGACCGCGTGGTCTAACCTAACAACAGATGCGAATAAACTCCCTTATTTTACTGGACGGAACCAAATCGGGCTAACTAACGTAACGTCAACAGGTCTGAATCTGCTAAGCAAAGGAAGCGTTGATGCGGTCTTACTGTATCTTGGATTGACAGAAACCATAAAGGCAGCTAAGACAGCATTGCAGGCAGGGAATAACGGTAGTGATATCGTAGATAAAGTTGCGTTTGCTAAAACGATCGGATTATCGCCAGAGACGTACCTGAAATTTAATGGTGCTATGGCGACGGACGCAAATCTGAATACCTTCGGTCCAGTCGAAGCATCTGTGGGTATTTGGTCTAAACCAATAACGACGAACGCGGACGTCGCCCACAATTTCCCTGAAGCAAACGCCGCAGGTTACATTGAAGTGCTCCCAACCGGGCAATTCGGTGGAACACAACGTTACACTGTACGTACCGGCAATATTTACGTACGTAGTTTAACGGCATCATGGAACGGCCAGGATGGTCCATGGGGCGAATGGTTAAAAGTCGGTAACGCCGCTGCTACAGCAGCTAAACTTGCTACGGCAAGAACGATAGGTGGCGTTAGCTTCGACGGTTCTGCTAACATCGATCTTCCCGGTGTAAATAAAGCAGGCACGCAAAATACCAGCGGTAATGCCGCTACAGCGACCAAGCTACAAACTGCACGTAGAATCGGTGGCGTTGCCTTTGACGGAACAGCGGATATTGCATTACCGGGCGTTAATGCGACAGGCAATCAAAATACAACCGGTAACGCAGCTACTGCCACGAAATTGAAAACCGCTGTTACGATCGGTGGTGTGAGTTTCGATGGTTCGGTCAGCATCAGTCTACCGGGTGTTAACGCTGCAGGAAACCAAGACACCAGCGGAAACGCAGGAAGCGCAACCAAGCTACAGACCGCCCGTAAAATCGGTGGTGTCGCTTTTGACGGTACAACTGATATCGCATTACCTGGCGTCAATGCAGCTGGTAATCAGAATACGACGGGTAACGCTGCGACAGCCACGAAGTTGCAAACGACCATTACGATCGGTGGAGTTTCTTTTGATGGTTCTGCTAGCATTAACCTACCTGGTGTCAACGCCGCGGGCAATCAAAGCACTTCCGGAAACGCCGGTTCAGCAACAAAACTCCAGACGGCGAGAACCATAGGGGGTGTGTCGTTTGATGGGACTGCCAACATTGATTTACCGGGTGTGAACAAAGCGGGTAACCAGAGCACTTCTGGTAATGCGGCTACTGCCACGAAACTCCAAACGGCACGGAGGATTAATGGGGTCGCCTTTGACGGTACAACTGATATTAGCTTTAGCATTAACGTGCTCGCTTCCAAGGGACGGGTCACCGCTTTAGCTAATGCGACCCAGGGTAGCAATACGGGTATCCAGATGTATGAAGCGTACAATAACGGATACCCTACAGCGTACGGCAATATTATTCATCTTAAAGGCGCAACCGCAGTAGGTGAAGGTGAGATCCTTATTGGATGGTCTGGTACATCGGGGGCGCATGCGCCAGCCTATCTTCGTTCTCGTCGGGATGCAGCCGATTCGAATTGGTCGGAATGGGCACAGATCTATACATCTAAGGATAGTATCCCTGGTGTGAATGCAACAGGTAACCAAAACACCACGGGGAACGCGGCATCCGCAACGAAGTTGCAAACGGCAAGGACGATTGGCGGCGTTTCATTTGACGGAACAGCAAATATCAGCCTACCTGGGGTAAACACCACCGGTAACCAAAGCACAACCGGTAATGCCGCCACGGCGACAAAACTACAAACGGCAAGGACGATTGGCGGTGTCGCGTTCGATGGTACGGCAAATATCAGTCTGCCGGGTGTTAACGCAGCAGGAAACCAAGACACTACGGGGAATGCCGCCACGGCGACAAAACTGAAAACAGCCCGCACCATTGGTGGGGTGTCTTTCGACGGTAGTGCGAACATCAATCTACCAGGTGTTAACGTCGCGGGGAACCAGAATACATCAGGGAACGCAGCCACGGCGACGAAGTTGCAAACTGCGCGCACGATTAACGGTAAACCTTTCGATGGTACAGCTAATATCACGTTAGCAGCTAAAGATCTTGGTTTAGCCGATTCTAGCGGATATGTCGGACGTTTACTGAACATGCGTGTTTTCACATCGTCAGGGACGTACACTCCAACACAAGGAACAAAACGGATTAGAGTAACAATAACCGGTGGCGGCGGTGGCGGCGGTGGCTGTCAGGCTTATTCCAACAGCGAAACGTTTTTTGGTGCTGGGGGAGGAGCTGGCGGAACAGTAATTTCGGTTATAACGGTAACAGCTGCTAGTTATTCTGTTATAATTGGTTCTGGTGGTTCCGGTGGCTCTGGGGCGACGTCTGGGAACGGGGGTGGGGATAGTAAATTTGCATCCCTGCTAACTGCTCCCGGCGGGCAAGGCGCAGGAAAAACAACTGTCACAAACACTGGCGGTGGCTATGGGGGCGCACCTGCTACCGGGGATATACGCATTCCGGGCGGAGACGGTAGCGATGGACAAGCCGGTACTATTGCCGTCGGTGGATGTGGGGGTGCGTCATATTGGGGCGGTGGCGGTCGCGCTGGTGTTGGCACCGCCCATAACGGCCTCGCGCCTGGTTCGGGTGGTGGTGGTGCTTACGATAACTCTTACTCAGGAACCGCTAAGCCTGGTGGGCGTGGTGCTAATGGGATTTGCATCATCGAGGAGTTTATGTAA

Genome Context

Tertiary structure

PDB ID

946481af3aa667142fd48b12604c414fe2901304bb051add559c7136688de672

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6504

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Literature

Title	Authors	Date	PMID	Source
Still something new to discover - new insights into E. coli phage diversity and taxonomy	Korf,I.H.E., Adriaennsens,E., Dreiseikelmann,B., Kropinski,A., Nimtz,M., Meier-Kolthoff,J.P., Rohde,M., van Raaij,M. and Wittmann,J.	2019-05-17	—	GenBank

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence

Literature