Protein

View in Explore
Genbank accession
WDS61782.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,60
TF
Evidence RBPdetect2
Probability 0,79
Protein sequence
MADKLKPAFRVTYGLDAATEKVINVGMADKNVGSDGVNVDFFNEYNTLPHYKENRGYDVQHAVIFNNRAWYALENIPKPAGPFNPAKWQSLRVDPTWENTGNVNPVRLRSGQYLEIFTGGGAVTYTLPPSPTKGDTITIKNSGARAGHGEPHVISTEAAPLYNINVYDQLKNNASLTRFVITKNRTTITMIFDGSAWNLQEDQTETNLVRMTQGTESEVNVGDTLMAMTSKGAMSVKLPKNVMDGESIQMYDAEGYMAKYHVTVKPNTGQKIDMSASNLVCRKTGVWTFTWNQAAGSWTTYNTDKRMRVRQIQSSTNAESFDYIMYQNMAGTTLAEVVLPDSVENGDMIIVDCKMMRRGQKLTVKVPDGSPLEICTTKNDQIPRYSEYGVAAGGALPRVKSIDVVAGIGQNYPAVMTFSYMESADGNTRLWYLIDSAPQIERVDAKNRSRVGVAPLATQDEVNKNHEQNPDDESIVTPKTLANMTATVDRRGIAMTVGPAEILETDETKLNADKILTVYRLNQRTALENRKGVAAIATQSEANGSTDDSKIITAKKLNARKATPTQTGIAATVALGGTPGTTRTGAGTGVYNHADEINIVTPKALREYKATETASGAVWLATDDEVRNGTQHAANIPTVVTPVSLGKRIAQETNHGLIAIATQDETNTGTNDTKAVTPKKLNERLATDTMTGLSRFATDSEFAAGTKNSNAVATVNAKGQLSVDPSRIKGYFSDPARWSQDSESGTDISGNFWDGMTYKILKATAVQRGTLRIGTDAEVKNGAINDVVVTPLTLQNKKANTIAWGITRYSTDAEMYGSSEAVAGQITTNLLGLRRAFKNGINDATYNGFAARMGGDVTGIAGVVQLANEDYSTGVVDKVNGTTKFDLSKSKGDGWAITPRGLHLALQNFVPVQGVAYDSDRLGGVVAADWVKRTVAQTITAVHTFAEIPVFSKGATASTGEISAPRIVSRDNYSQSLVIGTTGQDGASGLQIRSKRTGVAGQNDWTIWSHGGQSSDLAPGQFGIGPGDGKSPILILDSNGSSSFKGDLGVGGTLSVAGNDISLQGRQVVTKVAGQNTLEFAKNNAVRIGSTDTNSTVVINRDGAEIGKVLHTGNVQSHLDDVYLRQSGGTISNTFTVKGTGVISDVAMFNKVVSNSPVSSYPNGYFCVEIVDTATANTYPRFAPYPGQDPNQYPADTANTGTLTQVGQDTGRIQYWSRKGSRAVYVRTVAVNGTTWNAWGRMYTSDMPPAPDEIGAWKPGEVTDSITVTDYVKIKNLIIRPNPVTKTVDFEWTDN
Physico‐chemical
properties
protein length:1295 AA
molecular weight: 139376,22140 Da
isoelectric point:6,59204
aromaticity:0,07027
hydropathy:-0,38332

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WDS61782.1
1 1295
Domain Start End Length (AA) Confidence
N-terminal 1 351 351 0,5715
Central domain 352 551 201 0,1221
C-terminal 552 1295 743 0,3568
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-351
Central
352-551
C-terminal
552-1295

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_Cdu_VP8
[NCBI] 		3020854 No lineage information
Host Cronobacter dublinensis
[NCBI] 		413497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61782.1 [NCBI]
Genbank nucleotide accession
OQ361773 [NCBI]
CDS location
range 146385 -> 150272
strand +
CDS
ATGGCTGATAAATTAAAACCAGCTTTCCGCGTCACATACGGCCTTGATGCGGCAACTGAAAAAGTCATAAACGTTGGAATGGCAGATAAAAATGTTGGTTCCGACGGAGTGAACGTTGATTTCTTCAACGAATACAACACTCTTCCGCACTACAAAGAAAACCGTGGCTATGACGTTCAACATGCCGTGATTTTCAATAACCGGGCTTGGTATGCGTTAGAGAATATTCCTAAACCAGCAGGTCCTTTCAATCCTGCAAAATGGCAATCGCTTCGTGTTGACCCAACTTGGGAAAACACTGGCAACGTAAACCCGGTTCGTCTTCGTTCTGGTCAGTATTTGGAGATTTTCACAGGTGGTGGTGCAGTAACATACACTTTGCCTCCTTCTCCAACTAAAGGCGATACTATCACGATCAAAAACTCTGGTGCACGAGCAGGCCACGGTGAACCTCATGTCATTTCGACTGAAGCAGCACCGCTCTACAACATCAACGTTTATGATCAACTTAAGAATAATGCTTCTCTGACTCGGTTTGTGATAACTAAAAACCGCACTACCATCACAATGATTTTTGATGGTTCTGCTTGGAACTTGCAAGAAGATCAAACCGAAACTAACCTAGTTCGAATGACTCAAGGTACCGAATCTGAGGTTAACGTTGGTGACACTTTGATGGCTATGACTTCTAAAGGAGCCATGTCAGTTAAGTTGCCTAAGAACGTCATGGATGGCGAATCAATCCAGATGTATGATGCTGAAGGTTACATGGCAAAATACCATGTCACTGTTAAGCCAAACACTGGGCAGAAAATCGATATGTCAGCCTCTAATCTGGTTTGTCGTAAAACTGGTGTATGGACTTTCACTTGGAACCAAGCAGCAGGTTCATGGACTACATACAACACTGATAAAAGAATGCGAGTGCGCCAGATTCAGAGCTCCACTAATGCTGAATCATTCGATTACATCATGTATCAGAACATGGCCGGCACTACGTTAGCAGAAGTTGTTCTTCCAGATAGTGTAGAAAATGGTGACATGATCATCGTCGATTGTAAGATGATGAGACGCGGACAGAAGTTGACTGTCAAGGTTCCAGATGGTTCTCCTTTAGAGATTTGCACAACTAAAAATGATCAAATTCCTCGCTATTCAGAGTATGGTGTAGCGGCTGGTGGTGCATTGCCGAGAGTCAAATCAATTGATGTAGTAGCAGGTATTGGCCAAAACTATCCTGCTGTGATGACATTCAGTTATATGGAAAGTGCTGATGGAAATACTCGGTTATGGTATTTGATTGATTCTGCTCCACAAATTGAGCGTGTAGATGCTAAAAACAGATCACGAGTCGGTGTTGCTCCTTTAGCAACTCAGGATGAAGTTAACAAGAACCATGAACAGAACCCTGATGACGAGTCGATTGTAACTCCAAAAACTTTAGCAAATATGACTGCTACGGTAGATCGTCGTGGTATTGCCATGACTGTAGGACCAGCAGAAATTCTTGAGACTGACGAAACTAAGCTCAACGCAGACAAAATATTGACTGTTTATCGTCTGAATCAGAGAACTGCACTAGAAAATCGTAAGGGCGTAGCAGCAATCGCTACACAATCAGAAGCTAACGGTTCTACTGACGATTCCAAGATCATTACTGCTAAAAAGTTGAATGCTCGTAAAGCTACTCCAACTCAGACGGGTATTGCTGCTACTGTGGCTTTAGGTGGTACTCCTGGCACCACTAGAACCGGTGCTGGGACTGGTGTGTATAATCATGCTGATGAAATCAACATTGTTACTCCAAAGGCATTGAGAGAGTACAAAGCCACCGAAACTGCGTCAGGTGCAGTATGGTTAGCAACAGATGATGAAGTGCGAAACGGAACTCAGCATGCTGCGAATATTCCAACTGTAGTAACTCCTGTTTCACTCGGTAAGCGAATTGCTCAAGAAACCAACCATGGTCTTATCGCTATAGCTACACAGGATGAAACTAATACTGGAACCAACGACACTAAAGCAGTTACTCCTAAGAAACTGAATGAGCGTCTTGCTACAGATACTATGACAGGCTTAAGCAGATTTGCTACTGATTCAGAGTTTGCAGCTGGCACTAAAAATTCAAACGCAGTTGCTACTGTTAATGCTAAAGGTCAATTGTCTGTCGATCCTTCTAGAATCAAAGGTTACTTCTCAGATCCAGCTCGTTGGTCTCAAGATTCTGAGTCTGGAACTGATATTTCAGGTAACTTCTGGGATGGAATGACTTATAAGATTCTTAAAGCTACTGCAGTTCAACGAGGTACGCTGAGAATTGGTACGGACGCCGAGGTTAAGAATGGAGCCATCAACGATGTTGTCGTAACTCCTCTTACTCTCCAGAATAAGAAAGCAAACACTATTGCTTGGGGTATAACTCGGTATAGCACTGATGCTGAGATGTACGGTTCATCTGAAGCGGTTGCAGGTCAGATCACAACCAACTTGTTAGGTTTGAGAAGAGCTTTCAAAAACGGCATAAATGACGCAACTTATAACGGATTCGCTGCTCGTATGGGCGGAGATGTGACTGGAATTGCAGGTGTTGTTCAACTCGCTAACGAAGATTATTCTACAGGAGTTGTTGACAAAGTCAATGGCACTACAAAGTTTGATTTGTCTAAATCTAAAGGTGATGGCTGGGCAATAACTCCTCGTGGTCTGCATTTAGCTCTTCAGAACTTTGTTCCAGTTCAAGGTGTAGCGTATGATTCTGATCGTTTAGGTGGTGTAGTTGCTGCAGATTGGGTCAAACGTACTGTTGCACAGACCATTACGGCTGTTCATACCTTCGCAGAAATTCCAGTGTTCTCTAAAGGAGCTACTGCTTCAACAGGTGAAATCAGTGCCCCTCGAATTGTTTCGAGAGATAACTATTCTCAATCTCTGGTTATCGGTACTACAGGTCAAGATGGAGCATCCGGTCTTCAGATCAGATCTAAGAGAACTGGTGTTGCAGGTCAAAACGATTGGACTATTTGGTCTCATGGTGGTCAAAGTTCTGATTTAGCTCCAGGCCAGTTTGGTATCGGACCAGGAGATGGTAAATCACCTATTCTGATTCTGGATTCGAATGGTTCTTCGAGCTTCAAAGGAGATCTAGGAGTTGGTGGAACCCTGAGTGTAGCAGGTAATGATATTTCGCTTCAAGGTAGACAAGTCGTTACTAAGGTAGCAGGTCAAAACACTCTTGAATTCGCCAAAAACAACGCAGTTCGTATCGGGTCTACTGACACCAACTCAACTGTTGTTATCAACCGTGATGGTGCAGAAATTGGTAAGGTGCTTCATACTGGAAACGTACAGAGCCATTTAGACGATGTTTATCTGCGTCAATCTGGCGGTACAATTTCCAATACGTTCACCGTTAAAGGAACTGGCGTTATATCTGATGTTGCAATGTTCAACAAGGTAGTTTCAAATTCTCCTGTATCGTCTTATCCAAACGGATATTTCTGTGTTGAAATTGTTGATACTGCAACTGCGAATACCTATCCTCGATTTGCTCCATATCCAGGACAAGATCCAAATCAGTATCCAGCAGATACAGCAAACACTGGTACTTTAACTCAAGTTGGACAAGATACTGGTCGTATTCAGTACTGGTCTCGTAAAGGTTCAAGAGCAGTTTATGTTCGTACTGTAGCTGTTAATGGAACTACTTGGAATGCTTGGGGAAGAATGTACACCTCGGATATGCCTCCTGCTCCTGATGAAATCGGTGCATGGAAACCAGGTGAAGTTACTGATTCTATCACAGTTACCGATTATGTGAAGATCAAAAACTTGATTATCCGACCTAACCCAGTCACTAAGACTGTAGACTTCGAATGGACTGACAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f409666213e27648d4b6bc49d21ad83e3682d36fb1e0d41b1cf8068c916001e3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5415
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50