Protein

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Genbank accession
ALP46901.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 0,86
Protein sequence
MKLKFLSLLLFVSFSSHSSNISRIICKLSNSNGTATSAIWPQPYLLNDKLCFDIRIDSGNACVADGKTTTWFTESVIIMQNNESLGRDDTWFRVNRPTINDLRIAYTVEASRDKVNWIPQSHVTINRISGEAIDWAIYEHGGTSYQCHLEGKKI
Physico‐chemical
properties
protein length:154 AA
molecular weight: 17429,58240 Da
isoelectric point:7,69568
aromaticity:0,09740
hydropathy:-0,21818

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALP46901.1
1 154
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0005
Central domain 11 143 134 0,0041
C-terminal 144 154 10 0,9949
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-143
C-terminal
144-154

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage Rac-SA53
[NCBI] 		1759531 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALP46901.1 [NCBI]
Genbank nucleotide accession
KU052037 [NCBI]
CDS location
range 43062 -> 43526
strand -
CDS
ATGAAATTGAAATTTTTATCCCTACTTCTTTTTGTGAGTTTTTCTTCACACTCATCTAACATATCAAGAATAATATGTAAGCTATCTAATAGCAACGGCACCGCAACCTCCGCAATCTGGCCCCAACCTTACCTTTTAAATGATAAATTATGCTTTGATATTAGAATTGATTCTGGAAATGCATGTGTTGCCGATGGTAAAACAACAACGTGGTTTACTGAATCAGTAATTATAATGCAAAACAACGAATCATTAGGCCGTGATGATACTTGGTTTAGAGTCAATCGCCCAACAATTAATGACCTACGTATAGCATATACTGTCGAGGCATCTAGGGATAAAGTTAATTGGATTCCTCAATCTCACGTAACTATTAATCGGATTTCTGGAGAAGCTATTGATTGGGCGATTTATGAACACGGCGGAACGTCTTACCAGTGCCATCTTGAGGGCAAAAAGATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
5e711cce2ebaf9d9f069fbb1e2a182560b5e1f86129701d5a1a2b828726d4403
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6562
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The chromosomal nature of LT-II enterotoxins solved: a lambdoid prophage encodes both LT-II and one of two novel pertussis toxin-like toxin family members in type II enterotoxigenic Escherichia coli (ETEC) Jobling,M.G. 2016-01-10 — GenBank