Protein

View in Explore
Genbank accession
YP_007003187.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MAIMMNNYPHDCGNAGLVQKFIGTAYQTVKFVADNMHYIKTIYDMLTQYNMLACVESVEQLKNIDAKQVRFARIYELDGLEKRYVDYAFIDNDESGIKPNGIQYSGSWIKVGTSSAGTGGDGSRDIAWVYNNGSAQGGEESIIVPEQTAAVTCIYVNGNYQYPRLGFEYDELSQTIRLAQPLEEGDTVIAMLSGLPADPETPNVDNFKYFNWVYNNGKANGGEQTFRPPYNFKTVVAVFINGLRKEPQYHFTWNSEGLVQLREPVKENDFVVIQIGGDVHSLLLPNVMSGYTFKGGATLRTINDHIYDSVSKKWYQWIGVYPKHINENTVAADQINTDGGIFNYLNPLGLWIELNKHDIILKDSVTLKSYKLKIENGNLGVEEIQ
Physico‐chemical
properties
protein length:385 AA
molecular weight: 43318,25860 Da
isoelectric point:5,04306
aromaticity:0,11688
hydropathy:-0,33896

Domains

Domains [InterPro]
DC_0041
STR
50–206
DC_0041 G3DSA:2.10.10.80
DC_0397
ATT
198–379
DC_0397
IPR040775
RBD
289–326
IPR040775
YP_007003187.1
1 385
Architecture
STR
ATT
STR 50-197 | ATT 198-379 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007003187.1
1 385
Domain Start End Length (AA) Confidence
N-terminal 1 350 350 0,9777
Central domain 351 374 25 0,0131
C-terminal 375 385 10 0,9891
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-350
Central
351-374
C-terminal
375-385

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterobacter phage EcP1
[NCBI] 		942016 Uroviricota > Caudoviricetes > Schitoviridae > Eceepunavirus EcP1 >
Host Enterobacter cloacae
[NCBI] 		550 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007003187.1 [NCBI]
Genbank nucleotide accession
NC_019485 [NCBI]
CDS location
range 51147 -> 52304
strand -
CDS
ATGGCTATAATGATGAATAACTACCCGCATGATTGTGGTAATGCAGGTTTAGTGCAGAAATTTATCGGTACTGCTTATCAGACTGTTAAGTTTGTTGCCGATAACATGCACTACATCAAAACAATCTATGACATGCTTACCCAATATAATATGTTGGCCTGTGTTGAATCTGTAGAGCAGCTTAAAAATATCGATGCTAAACAGGTACGCTTTGCCCGTATTTATGAACTGGATGGTTTAGAGAAGCGATACGTCGATTATGCTTTCATTGATAATGATGAAAGTGGCATCAAACCTAATGGCATTCAGTATTCTGGTTCATGGATTAAAGTTGGAACATCCTCTGCCGGTACAGGCGGTGATGGTTCTCGTGATATTGCATGGGTGTACAATAATGGTTCTGCACAAGGTGGAGAGGAATCTATTATTGTTCCTGAGCAGACTGCGGCTGTTACCTGTATTTATGTAAATGGTAATTATCAGTACCCTCGTTTAGGTTTTGAATATGATGAGTTAAGCCAGACCATCCGTTTAGCTCAACCTTTGGAAGAAGGTGATACTGTTATTGCTATGTTGTCTGGTTTACCGGCTGATCCTGAAACACCTAATGTGGATAATTTTAAATATTTCAACTGGGTTTACAATAACGGTAAAGCAAACGGTGGTGAGCAAACATTCCGTCCGCCATACAACTTTAAAACTGTTGTAGCAGTATTTATTAATGGATTGCGTAAAGAACCTCAGTATCATTTTACGTGGAACAGCGAAGGGTTAGTACAGCTTCGTGAACCAGTAAAAGAAAATGACTTTGTAGTTATTCAGATTGGTGGAGATGTGCATTCATTACTGCTGCCTAATGTAATGTCTGGGTACACTTTCAAAGGCGGTGCAACTTTGCGTACCATTAATGATCACATTTATGACAGTGTTTCTAAAAAATGGTATCAGTGGATTGGTGTATATCCTAAACACATCAATGAAAATACTGTAGCCGCAGATCAGATTAATACTGATGGAGGTATATTCAATTATTTAAATCCGTTAGGTCTTTGGATTGAACTAAATAAACATGACATAATTTTAAAAGATTCAGTTACATTAAAATCCTATAAATTAAAAATAGAAAATGGCAATTTAGGTGTTGAGGAAATTCAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b5fe0dd3159c6b79459af11ee134e53a672241b90f61ec35cae36dcd9df88d11
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7397
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete nucleotide sequence of the bacteriophage EcP1, a new member of the N4-like viruses Zhu,J., Rao,X., Tan,Y., Hu,Z., Xiong,K., Chen,Z., Li,S., Yang,J., Jin,X., Chen,Y. and Hu,F. 2017-12-06 — GenBank