Protein

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UniProt accession
A0A8S5P918 [UniProt]
Protein name
Collagen triple helix repeat protein
RBP type
TSP
Evidence RBPdetect
Probability 0,61
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MIKNNVYYEFFASYMVPNSNEVGYWIDLGANSKGKVIKVYNPDIKSWVKLTDATSEDAVAPFIGSNGNWWIDNRDTGIPASGKSPIIGENGNWWIFDSAYNEYVDSGYTAFGRSAYDYAIEHGYTGTEEDFSRMLAEVPNAVKDAKQAVKDSKEVLQNPPKIVDGNWYIYDYVNDTYQDSGINAVGDAFTIVKTYPSIQAMEDDYNNPEVKTGQFVMIDTGDVENEEDSRLYLKGDTEWKFISDLSGAQGIQGLSAYQVAVQHGFEGTEAEWLISLKGEKGETGPKGDKGDTGEKGATGERGPQGLQGERGLQGVQGEKGEQGIQGPVGPKGEQGEQGIQGIQGPQGEPGPQGPKGDTGSGLNIKGELDSESQLPQEGVSGDAWLISGNLYVYVGENGNVESNPKWSNVGSIQGPAGPQGPVGPKGEQGEPGPKGEPGADGAPGIQGPKGDPGQKGEKGDPGSDASVTKQNVEAVLTGDITSHNHDSRYISKSNTGTYTPTADYHPATKKYVDDTVAAVDVTEQISGKADKTYVDSKLDTKVDKEEGKGLSSTDFTSAEKSKLARLNGYVVNMADNMVPTAEFGRITYSFKNESTGSNGNTQSKVIQIPAATTSTAGLITAEGFNKLTGLPTSEEIDQKINTAVGSVYKVKGSVANYEALPKDNVTIGDVYNLEDTGANYVATSSTPDWDKLSETVDLSGYLTKTDAASTYQPKGNYLTSVPEEYVTETELNAKGYATTTQVNTKLDSSAYTAADVLSKVKTVGGVGSGLDADLLDGKQGSEYALKSDISDEVYVSEGTQPDGEQEVWIDLSDNTFDELVVTEAPKDGKQYARQNGTWVEVEAAPKDETVKITVASNQPSDSNINGVTITVAYENVSKQLTWEGTELSITVPVNSNYTITCSDITDYSTPEVQSFTATAGNTRNVTLTYNTTIVTLTVTSNNPTLFVDNASISISGAVTKSLSGNLTYTFNVPTGKQFTVAGWEVIVNTDTTYRKYDIPEKETHTATGITQNVSYVYYGTKVTLNITADEGTITPVVGLTPAMWTHPLSLGTHDFILPKNYEYRFQGSEVTNYDTPQIQTGNTGTEYSDITVNLAYKILAEETYAMWVQFNKSASTTTLKRGGNLDVITSLTSKFKRCLALPQNDGSAAIAYLGSTDSNKWEDGSTVNPTGAYHYVYYMVHFPKYYYRMDNSGAAVNKYKLYISEKKINENYKEERECLIGVFEAYNTDGKLTSRKSTVTTGKQTIETFFNQAQANGSNWGLIDYRAHKTIANLFCAKYGNTDISADNSSIPCSGGTRSWGSVAGNTISLGDRDGTFNNSSNFLGLEDCYYGKFEFVQGINIIARQWIVYDGGLKVNTDISGLTSAGYTNVRQIVGPTESNTTASSSNGWIVGIAHGEYADIMPSNTTGGSDTTYYADYYYHDTGNRVFMRSGSSDLESQCGVFFSLAASGSSYVRSDIGSRLGFYGKIVVKTKDEFLALEPGFNG
Physico‐chemical
properties
protein length:1486 AA
molecular weight: 160345,94360 Da
isoelectric point:4,61575
aromaticity:0,09690
hydropathy:-0,53230

Domains

Domains [InterPro]
DC_0947
STR
11–85
DC_0947 DC_1967 DC_0385 DC_1355 G3DSA:6.20.230.10
IPR050149
Unmapped
247–464
IPR050149 DC_0618
IPR008160
STR
302–360
IPR008160 IPR008160
A0A8S5P918
1 1486
Architecture
STR
ATT
STR
ATT
STR
STR 11-85 | ATT 132-309 | STR 310-819 | ATT 820-843 | STR 844-1479 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5P918
1 1486
Domain Start End Length (AA) Confidence
N-terminal 1 34 34 0,9406
Central domain 35 1103 1070 0,0552
C-terminal 1104 1486 382 0,9132
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-34
Central
35-1103
C-terminal
1104-1486

Taxonomy

  Name Taxonomy ID Lineage
Phage Podoviridae sp. ctU7u6
[NCBI] 		2825252 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE03101.1 [NCBI]
Genbank nucleotide accession
BK015359 [NCBI]
CDS location
range 31790 -> 36250
strand +
CDS
ATGATAAAGAATAACGTATATTATGAATTCTTTGCAAGCTATATGGTACCCAATTCTAATGAAGTTGGGTACTGGATAGACTTGGGAGCAAATTCAAAAGGAAAAGTAATTAAAGTATATAATCCTGATATTAAGTCTTGGGTTAAACTAACAGATGCTACTAGTGAAGATGCTGTTGCTCCTTTCATTGGTTCTAATGGTAACTGGTGGATAGATAATCGTGATACAGGTATCCCTGCTTCTGGTAAAAGTCCAATTATTGGAGAGAATGGTAATTGGTGGATATTTGATTCTGCATATAATGAGTATGTTGATAGTGGTTATACAGCGTTTGGTAGAAGTGCTTATGATTATGCTATAGAGCATGGGTATACAGGTACTGAAGAAGATTTTAGTAGAATGCTTGCAGAAGTACCTAATGCAGTTAAAGATGCTAAACAAGCTGTAAAAGACTCAAAAGAAGTACTTCAAAATCCACCAAAGATTGTAGATGGTAATTGGTATATCTATGACTATGTAAATGATACTTATCAAGATAGTGGTATTAATGCAGTTGGTGATGCATTTACTATTGTAAAGACATACCCTTCAATCCAAGCTATGGAAGATGATTACAATAATCCTGAAGTAAAGACAGGACAATTTGTAATGATTGATACAGGTGATGTTGAAAATGAAGAAGATTCTCGATTGTATCTAAAAGGAGATACTGAATGGAAATTCATATCAGACTTATCTGGTGCACAAGGTATTCAAGGTTTATCAGCATATCAAGTAGCAGTACAGCATGGTTTTGAAGGAACAGAAGCTGAATGGTTAATCTCTTTGAAAGGTGAGAAAGGTGAAACTGGGCCTAAAGGAGATAAAGGTGATACTGGAGAAAAAGGGGCTACTGGTGAAAGAGGACCTCAGGGTTTACAGGGAGAAAGAGGTTTACAAGGTGTCCAAGGTGAAAAGGGTGAACAAGGTATACAAGGGCCTGTTGGACCTAAAGGTGAACAAGGAGAGCAAGGTATACAGGGAATTCAAGGGCCACAAGGAGAACCTGGTCCACAAGGACCTAAGGGAGATACTGGTTCAGGATTAAATATTAAAGGGGAATTAGATTCTGAATCACAATTACCACAAGAAGGTGTATCTGGTGATGCTTGGTTAATTTCTGGTAATCTATATGTATACGTAGGGGAAAACGGTAATGTTGAATCAAATCCTAAATGGAGTAACGTAGGTAGTATTCAAGGACCAGCAGGACCACAGGGGCCTGTAGGACCTAAGGGGGAACAGGGAGAACCTGGTCCTAAAGGTGAACCGGGAGCTGATGGAGCACCTGGAATACAAGGTCCAAAAGGTGATCCTGGTCAAAAAGGAGAGAAAGGAGACCCGGGTAGTGATGCTTCTGTAACTAAACAGAATGTAGAAGCTGTACTTACTGGGGATATTACTAGTCACAATCACGACAGTAGATATATATCTAAAAGCAATACTGGTACATATACACCTACTGCAGATTATCATCCTGCCACTAAGAAGTATGTAGATGATACTGTGGCAGCAGTAGATGTTACTGAACAAATCTCTGGTAAAGCTGATAAAACTTATGTAGATAGTAAGTTAGATACCAAAGTAGATAAGGAAGAAGGAAAAGGATTAAGTTCTACTGATTTTACTTCAGCTGAAAAAAGTAAATTAGCAAGACTTAACGGTTATGTTGTAAATATGGCCGATAACATGGTTCCCACAGCTGAATTTGGTCGTATTACATATTCCTTTAAGAATGAATCAACAGGTTCTAACGGAAATACTCAATCTAAAGTAATACAGATACCAGCAGCTACAACTTCTACTGCAGGTTTAATTACTGCTGAAGGGTTTAATAAACTTACTGGATTACCCACATCAGAAGAAATAGATCAAAAGATCAATACTGCTGTAGGTTCAGTATATAAGGTAAAAGGTTCTGTAGCTAATTATGAAGCATTACCTAAAGACAATGTAACAATAGGCGATGTATATAATCTTGAAGATACAGGAGCTAATTATGTAGCTACTTCATCTACTCCGGATTGGGATAAGTTAAGTGAAACAGTAGATCTTAGTGGGTATTTAACTAAGACTGATGCAGCTAGTACTTATCAACCAAAAGGCAATTACCTTACTTCAGTACCTGAAGAATATGTAACCGAAACTGAATTAAATGCAAAGGGTTATGCTACTACTACTCAGGTTAATACAAAATTAGATTCTTCTGCATATACTGCAGCAGACGTATTATCCAAAGTAAAGACAGTGGGTGGGGTTGGTAGTGGTTTAGATGCCGACTTACTTGATGGTAAACAAGGTAGTGAATATGCTTTAAAATCCGATATATCCGATGAAGTATATGTAAGTGAAGGTACACAGCCTGATGGTGAACAAGAAGTATGGATTGATTTATCAGATAACACTTTTGATGAATTAGTAGTTACAGAAGCACCTAAAGATGGTAAACAGTATGCTAGACAGAATGGAACATGGGTAGAAGTAGAAGCAGCACCTAAAGATGAAACTGTTAAAATAACTGTTGCAAGTAATCAACCATCAGATTCTAATATTAATGGTGTCACTATTACTGTGGCATATGAAAATGTTTCTAAGCAATTGACATGGGAAGGAACTGAACTTAGTATTACTGTTCCTGTGAATTCTAATTATACTATCACATGCAGTGATATTACAGACTATTCTACTCCAGAAGTACAATCGTTTACAGCTACAGCAGGTAATACTAGAAATGTAACTTTAACTTATAATACTACAATAGTTACACTTACTGTTACTAGTAATAATCCTACATTATTTGTAGATAATGCTAGTATTTCAATATCAGGTGCAGTAACTAAATCATTATCAGGAAATTTAACTTATACTTTTAATGTACCAACTGGTAAACAATTTACTGTTGCTGGTTGGGAAGTAATAGTGAATACAGATACCACTTATAGGAAATACGATATTCCAGAGAAGGAGACACATACAGCAACAGGTATTACACAGAATGTTTCGTATGTTTACTATGGTACTAAAGTGACTTTAAACATTACAGCAGATGAAGGTACAATTACTCCTGTAGTAGGTTTAACTCCTGCAATGTGGACACATCCACTTAGTTTAGGTACACATGATTTTATTTTACCTAAAAATTATGAGTATCGTTTCCAAGGTAGTGAAGTAACTAACTATGATACTCCACAGATTCAGACTGGAAATACTGGAACTGAGTATTCAGATATAACTGTTAATCTAGCTTATAAGATTCTAGCAGAAGAAACTTATGCTATGTGGGTTCAATTCAATAAATCCGCAAGTACTACTACACTAAAAAGAGGTGGTAATTTAGATGTTATTACTAGTCTTACTAGTAAATTTAAAAGATGTTTAGCATTACCTCAGAATGATGGTTCTGCTGCTATTGCTTATCTTGGTTCAACAGATAGTAATAAATGGGAAGATGGTTCTACTGTTAACCCTACTGGGGCTTACCATTATGTATATTATATGGTTCATTTCCCTAAGTATTATTATAGAATGGATAACTCTGGCGCAGCAGTAAACAAATATAAATTATATATATCTGAAAAAAAGATTAATGAGAATTATAAAGAGGAGAGAGAATGTTTAATTGGTGTATTTGAAGCATATAATACTGATGGCAAATTAACCAGTAGGAAATCAACTGTTACTACAGGAAAGCAAACTATAGAAACTTTTTTCAATCAAGCACAAGCTAATGGGAGTAACTGGGGATTGATTGATTACAGAGCCCATAAAACTATTGCTAATTTATTCTGTGCTAAATATGGTAATACTGATATAAGTGCAGATAATAGTAGTATACCCTGTTCTGGTGGTACACGTTCTTGGGGTAGTGTGGCAGGTAACACAATATCGTTAGGTGATAGGGATGGAACGTTTAATAATAGTAGTAATTTCTTAGGTCTTGAGGATTGTTACTATGGTAAATTTGAATTCGTACAAGGGATTAATATTATTGCTAGACAATGGATAGTGTACGATGGAGGTCTTAAAGTAAATACCGATATTTCAGGTTTAACATCTGCAGGATATACAAACGTAAGACAAATTGTTGGCCCTACTGAATCTAATACTACTGCTTCCTCTTCTAATGGTTGGATTGTTGGCATTGCTCACGGAGAATACGCTGATATTATGCCAAGCAACACTACAGGAGGATCAGATACTACATATTATGCAGACTATTACTATCATGATACAGGTAACAGAGTTTTTATGCGGTCGGGTAGTTCGGACCTTGAGTCTCAATGCGGGGTCTTCTTTTCGCTTGCTGCTTCTGGTTCTTCGTATGTGCGTTCGGATATCGGTTCGCGGTTAGGTTTTTATGGTAAGATCGTAGTTAAAACAAAAGATGAATTTTTGGCGTTAGAGCCTGGGTTTAATGGATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
6d544b48d107f230d088a8446fbe0964f6243f2153010b26b1ee3ac27df63047
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6812
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50