Protein

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Genbank accession
XYH46485.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,90
Protein sequence
MSQNDFNIANQSFPATRSDLNSALQALASNSAGTTEPSTTYAYQFWYDETNELLKMRNSDNDAWITLAAFDQTNDEWEVRSAVIQAVDSAGVTIKTDDGVARITVADNGNVTIANNLTVSGNIDVSSGTIKLDGNYPVGSDNVALGNAALDDGSLSGGNNVAIGSDALAANTTGAQNTGVGKSVMLTNDTGSDNTAMGHDALKVNTSGNGHVAIGRNALLSNTTASNNTAIGLDALQNNTTGDANVAVGAQAADAVTTGSQITAVGYAALSAMTTGVDNTAVGYFSQLSVTTGSKNTTLGRESGRLITTGSANTIIGRYNGNQGGLDIRTSSNNIVLSDGDGNPQLYIDSSGSWYYGDIGGTAGTSNGTGGYLAGTNGQVYFSTTSGSGHYFNVTADNQNVVQFRSQGTTEGSVYVSGTTVSYLGGHLARWSRLMDDQKDLSLLKGTVMTNLDEMVVWPDEDNEQLNKMAVSSVEGDPNVAGVFIGWDNSDEHNDMNIAMTGDMIIRIAQGITVQRGDLLMSAGDGTAKPQGDDIVRSKTIAKVTSTHVTCTYDDGSYCVPCVLMAC
Physico‐chemical
properties
protein length:567 AA
molecular weight: 58834,45090 Da
isoelectric point:4,23765
aromaticity:0,05820
hydropathy:-0,25256

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYH46485.1
1 567
Domain Start End Length (AA) Confidence
N-terminal 1 110 110 0,6118
Central domain 111 314 205 0,8657
C-terminal 315 567 252 0,9509
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-110
Central
111-314
C-terminal
315-567

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-831
[NCBI] 		3417984 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Roseobacter sp.
[NCBI] 		1907202 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYH46485.1 [NCBI]
Genbank nucleotide accession
PV211014.1 [NCBI]
CDS location
range 14059 -> 15762
strand -
CDS
ATGAGCCAGAACGATTTTAACATTGCAAACCAGTCATTTCCCGCAACTCGCAGTGATCTGAACTCTGCATTGCAGGCATTGGCAAGCAACTCTGCTGGCACGACTGAGCCAAGCACAACATATGCCTATCAGTTCTGGTATGACGAAACCAATGAACTGCTGAAGATGCGCAATTCTGATAATGATGCGTGGATCACACTTGCCGCGTTTGACCAGACGAATGACGAATGGGAAGTGCGCAGTGCAGTTATTCAGGCTGTGGATAGCGCAGGCGTGACGATCAAGACCGATGATGGCGTTGCGCGCATCACTGTGGCTGACAATGGCAATGTCACGATTGCAAATAACCTGACTGTGAGCGGCAATATTGACGTATCCAGCGGCACGATCAAGCTAGACGGGAACTATCCTGTTGGATCAGATAACGTGGCGCTTGGGAATGCTGCGTTGGACGATGGTAGCTTGTCTGGTGGAAACAATGTTGCTATTGGAAGCGACGCCCTAGCAGCCAACACTACTGGTGCGCAAAACACTGGTGTTGGTAAGTCCGTGATGCTCACGAATGACACGGGTTCAGATAATACTGCTATGGGCCACGATGCACTGAAGGTGAACACTTCTGGCAACGGCCATGTAGCGATTGGCCGCAACGCACTGCTCTCCAACACCACTGCTAGCAACAACACTGCTATTGGGCTTGATGCGTTACAAAATAATACTACTGGTGATGCCAACGTAGCTGTTGGGGCGCAGGCGGCAGATGCCGTAACAACAGGAAGCCAAATAACAGCGGTAGGCTATGCGGCCCTGTCTGCAATGACCACAGGCGTTGACAACACTGCTGTTGGTTATTTTTCACAGTTAAGCGTAACAACAGGAAGCAAAAACACCACCCTTGGCAGGGAAAGTGGCCGTCTTATCACAACAGGTTCCGCAAACACCATCATAGGCCGCTACAACGGCAACCAAGGTGGCCTCGACATTCGCACAAGCAGCAACAACATCGTGCTGTCGGATGGGGATGGTAATCCTCAGTTGTATATTGATAGTTCAGGCTCTTGGTATTATGGCGATATTGGCGGCACTGCTGGAACAAGCAATGGCACTGGCGGTTATTTGGCCGGCACAAATGGTCAGGTTTATTTTTCAACTACTTCTGGATCGGGCCATTACTTCAACGTAACTGCCGACAACCAAAACGTCGTTCAATTCAGAAGCCAAGGCACAACAGAAGGCAGTGTCTATGTTTCTGGCACAACTGTTTCTTATCTTGGTGGTCACTTGGCCCGTTGGTCACGCCTAATGGATGACCAAAAGGACTTGTCATTGCTCAAAGGCACTGTGATGACGAACCTTGACGAAATGGTTGTTTGGCCTGATGAAGATAATGAACAGCTCAACAAAATGGCTGTATCCTCTGTTGAGGGTGATCCGAATGTGGCTGGTGTGTTTATTGGTTGGGACAATTCTGATGAACACAATGATATGAATATTGCCATGACGGGCGATATGATTATCCGCATTGCGCAAGGCATAACTGTGCAGCGTGGCGATCTGCTTATGTCGGCAGGCGATGGCACAGCCAAACCACAGGGCGATGACATTGTTCGCAGCAAGACCATCGCAAAAGTTACCTCAACGCACGTTACTTGCACATATGACGATGGCAGCTATTGCGTCCCGTGTGTGCTGATGGCGTGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2386ad23ce18f24407d3090a9361aac72e392463423286aea20d0617cf43f9b1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8558
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50