Protein

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Genbank accession
AOO11515.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,82
Protein sequence
MAVNNNYSKVRSHYGGYIGSIQVHSTPYLANINDPNGANFQEHVPAGYLKCDGSIKNAADFVALSTILGVGQNSKFRKTNVELREADQDTGDLGQFQLPDLGSKVIIPSRSVGDYLNTFVGDTEETRVGPAVEVLCNEGTQLTCDFIGNFRGIPVETSYDFRSSPKYQFETTSQSAFLDIENFQGHAHNANTNYLNYTTNHAVGGDGKDGGNASGNSGAGNALEQSEANTTALSSHTHRITKPTQYIHNFQYQHQPFDIPADNVNSTLNVSVENINKLDDVVTPFIIVTYIIKI
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32047,77850 Da
isoelectric point:5,17175
aromaticity:0,09184
hydropathy:-0,45068

Domains

Domains [InterPro]
DC_1651
STR
2–294
DC_1651
AOO11515.1
1 294
Architecture
STR
STR 2-294
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-RIM44
[NCBI] 		1278485 Uroviricota > Caudoviricetes > Pantevenvirales > Vellamovirus > Vellamovirus rhodeisland44
Host Synechococcus
[NCBI] 		1129 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AOO11515.1 [NCBI]
Genbank nucleotide accession
KX349291 [NCBI]
CDS location
range 36020 -> 36904
strand +
CDS
ATGGCAGTCAACAATAACTATTCTAAAGTCAGGTCACACTATGGTGGTTACATTGGATCTATTCAGGTTCATTCAACTCCATACCTTGCAAATATAAATGATCCCAACGGAGCAAATTTTCAGGAGCATGTTCCTGCTGGTTATTTGAAGTGTGATGGATCTATTAAAAATGCAGCTGACTTTGTTGCACTATCAACGATTCTGGGTGTGGGTCAGAACTCTAAGTTTAGAAAGACAAATGTAGAACTTAGAGAAGCAGATCAAGATACAGGAGACCTAGGACAGTTCCAACTACCTGATCTTGGATCTAAAGTTATTATTCCATCTAGATCAGTTGGTGACTACTTGAATACTTTTGTTGGTGATACTGAAGAGACTAGAGTTGGACCTGCTGTTGAGGTTTTATGTAACGAAGGAACACAGTTGACATGTGATTTTATTGGTAACTTTCGTGGAATACCAGTAGAGACATCATATGATTTTAGATCTAGTCCTAAGTATCAGTTTGAGACTACATCACAGTCGGCATTCCTAGATATTGAGAACTTCCAAGGTCATGCTCACAATGCAAACACAAACTATCTAAACTACACTACAAACCATGCTGTTGGTGGTGATGGTAAAGATGGTGGTAATGCTAGTGGTAACTCTGGAGCAGGAAATGCTTTAGAACAGAGTGAAGCTAATACTACAGCACTATCATCACACACTCATAGAATTACAAAACCAACACAATATATTCATAACTTTCAATATCAGCATCAACCATTTGATATTCCTGCAGATAATGTTAATTCAACATTGAATGTGTCTGTGGAAAATATTAATAAACTTGATGATGTGGTTACTCCTTTTATTATTGTTACTTACATCATTAAGATTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9520a92b1eae5f6a0490ee1a2a9524bebc94bdc0035e0f5cbd3e3d33b5bde09
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4751
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50