Protein

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Genbank accession
UOK16722.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MVDPINITDVQANETNVDWYADGERANSLVLNRPIKQIAGIVNEVINDLYGDGSSGISERIRKAQQAVIDGEIYAGANDQYLVVNDTIPANTRFVVVHVDGKNLVLLSADGSLLSGNVDAIGTSFDSFREVSATIATNPVALVTLETYMYRQGNLAIGWGYVGDGVVDDAPSLNKALQDSNLVITPVGTTPLLNSKLTVGDSTLNFMFSEVLADHNDQVFTLSSGKVLNAIIDGNAMDHTTYPSEVLPGDGATIKNVFYKNFHGITAYQTYPIKLPLFGAKNFVIEDVQMDNITRDDNGAVTGKGFVGGIFIESATLGTQETTSSGRVKGLTASNIYSVDAGSGVVQDSDLIRGYWDPVNGDISTLKWDIDFIDITARNVGKRVFKTGGINGCTIRNVRCYKDDGNGDMYSVISLTSESSDWVIDGVVGEGDFARGIEFTGNDHLVENVNLKSTAATTGYGLQMGGAIGIVRRARVSKVHLEGFSSGIYFYDSFDSTISQATLRDNASSVLTFNASGGNVNSIKDFDIVGGLMAIDGGAFLFMNDIRISGVELSSGSYTLDLRDGSINAKNILINANLNGRRCVNLDIKNGATVQLDDFTVIRNSDNGALQNDHCIFTTQESTGGGVLRGSKIRVVSNINPDNGGAAALGRELVLLQNINFAVDKFEIQNNAPRNSGSADFKVTGCEGVCKLGKLETLHTVSHGNIDVVAPTDAFILGELNIENGFANSIQGYVGTAFLKGGATLTNTINTPNTITIP
Physico‐chemical
properties
protein length:758 AA
molecular weight: 80738,20640 Da
isoelectric point:4,63888
aromaticity:0,07388
hydropathy:-0,05053

Domains

Domains [InterPro]
DC_2319
STR
1–155
DC_2319 IPR012334 DC_2296
IPR012334
STR
159–485
IPR012334
IPR011050
STR
160–386
IPR011050
UOK16722.1
1 758
Architecture
STR
RBD
STR 1-485 | RBD 486-758
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UOK16722.1
1 758
Domain Start End Length (AA) Confidence
N-terminal 1 170 170 0,9890
Central domain 171 734 565 0,9827
C-terminal 735 758 23 0,6910
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-170
Central
171-734
C-terminal
735-758

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiKT1024
[NCBI] 		2914035 No lineage information
Host Vibrio sp.
[NCBI] 		678 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UOK16722.1 [NCBI]
Genbank nucleotide accession
OM249648.1 [NCBI]
CDS location
range 75756 -> 78032
strand +
CDS
ATGGTAGATCCAATCAACATCACAGACGTTCAAGCAAATGAAACGAATGTTGACTGGTATGCAGACGGCGAACGTGCTAATTCTTTGGTCTTAAATAGACCAATAAAGCAAATTGCCGGTATCGTTAATGAAGTTATTAATGATTTATATGGAGATGGTTCATCTGGCATATCAGAAAGAATTAGAAAGGCTCAACAGGCTGTAATAGATGGGGAAATATATGCTGGTGCGAACGACCAATACTTGGTAGTTAATGACACCATTCCAGCTAATACTCGATTTGTGGTCGTTCATGTAGATGGAAAAAACTTGGTACTTCTATCTGCGGATGGCTCTTTATTATCGGGGAATGTTGACGCCATAGGAACATCGTTCGACTCGTTCCGAGAAGTTTCAGCAACGATAGCAACGAACCCTGTCGCACTAGTTACACTCGAAACTTATATGTACCGCCAAGGAAATCTTGCGATTGGTTGGGGATACGTTGGTGATGGAGTGGTTGATGATGCTCCAAGTTTAAATAAGGCACTTCAAGATAGTAATTTGGTCATTACACCAGTTGGTACGACACCACTTTTAAACTCTAAATTGACAGTTGGTGATTCAACTCTTAACTTTATGTTTTCTGAAGTATTAGCAGACCACAACGACCAAGTTTTCACTTTGAGCTCTGGTAAAGTTTTGAATGCAATCATTGATGGTAACGCTATGGACCACACAACATATCCGAGTGAAGTGTTGCCTGGTGATGGCGCAACTATTAAAAATGTTTTTTATAAAAACTTCCATGGTATCACTGCTTACCAAACTTATCCAATTAAACTTCCTTTGTTCGGTGCGAAAAACTTCGTCATCGAAGACGTTCAGATGGATAATATTACTCGAGACGACAATGGTGCCGTTACTGGTAAAGGTTTCGTTGGTGGAATATTTATTGAAAGTGCGACATTGGGAACACAAGAAACTACATCAAGTGGACGAGTTAAAGGTCTTACTGCTTCGAATATATATTCTGTTGATGCGGGTTCTGGTGTGGTTCAGGATAGTGACTTGATTCGTGGATATTGGGATCCAGTTAATGGTGACATATCGACACTTAAATGGGATATTGATTTTATTGATATCACTGCACGAAATGTTGGTAAACGTGTTTTCAAAACAGGTGGAATTAACGGTTGTACAATCCGAAACGTTCGATGCTATAAAGATGATGGTAACGGAGATATGTATTCTGTGATCTCTTTGACATCCGAATCTAGCGACTGGGTTATCGATGGTGTTGTTGGTGAAGGTGATTTTGCTCGTGGTATTGAGTTCACTGGTAATGACCACTTAGTTGAAAACGTCAACCTTAAATCTACCGCCGCAACAACCGGTTACGGACTTCAGATGGGTGGTGCTATCGGTATCGTTCGTCGTGCGCGAGTATCAAAGGTTCACCTAGAAGGGTTTAGTTCTGGTATTTACTTCTATGATAGTTTCGATTCGACCATTTCACAAGCAACATTAAGAGATAACGCATCTTCTGTACTAACGTTCAATGCATCTGGAGGTAATGTAAACTCTATTAAAGATTTTGATATAGTTGGTGGTTTAATGGCTATTGATGGTGGAGCATTCTTATTCATGAATGACATTCGTATTTCTGGGGTTGAGCTTTCGTCTGGTTCATATACATTAGACCTTCGAGATGGTTCAATCAATGCTAAAAATATACTTATTAATGCTAACTTAAATGGACGACGTTGTGTGAACCTCGACATCAAGAATGGCGCAACAGTTCAATTAGATGACTTTACAGTTATTCGTAACTCGGATAACGGAGCTCTTCAAAATGACCATTGTATCTTTACTACTCAAGAAAGTACTGGTGGTGGTGTTCTTCGTGGTTCGAAAATAAGAGTCGTTTCTAATATAAACCCAGACAATGGTGGTGCGGCAGCACTTGGTCGTGAACTAGTACTGCTACAGAATATCAACTTCGCTGTTGATAAGTTCGAGATTCAGAACAATGCACCAAGAAACTCGGGTTCAGCGGACTTCAAAGTAACTGGATGTGAGGGTGTTTGTAAATTGGGTAAACTAGAAACTTTACACACAGTTTCCCATGGTAATATTGACGTTGTTGCTCCTACAGATGCATTTATATTAGGTGAGCTTAATATAGAAAATGGATTTGCAAACTCAATTCAAGGATATGTAGGTACTGCATTCCTTAAGGGTGGGGCTACGTTAACTAATACAATTAACACGCCTAACACAATAACAATTCCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
57af3a9b11910d530ec5c168b7577bcac05c5025a08313dae0a7bd3242d408ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7048
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50